Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02598 ATGGCAGCAATGCGTTTGCTCTTCAATTTTCTCATTGTTCCCTTCTTTCTATCAACTTTTGTCTATGCCTATTCTTCAAATGATGTTAAACATTGGTGTAGCCAAACCCCAAACCCTCAACCATGTGAGTATTTCTTGAGCAACAACCCTAATCACCAAACCAAACCTATTAACCAAAAAAGTGACTTTCTCAAGATTTCATTACAACTTGCCCAAGAGAGAGCTCTCATAGGTCATGCAAATACTCTTTCACTTGGCACAAAGTGCCGCAACCAACTTGAAAGAGTTGCATGGAATGATTGTGTTGACCTCTATCAACAAACCATTCATAAACTCAACAAAACCCTAGACCCTAACACCAAGTGCTCCCAAGTTGATGCTCAAACATGGCTTAGCACTGCTCTCACAAACCTTGAGACATGCAAAGCTGGCTTCTATGAACTTGGTGTTCAAGACTATGTCCTTCCTCTAATGTCCAACAATGTTACTGAGTTGCTAAGTAACACTTTGGCTCTTAACATATACATTAGGAAATACTTTCATTTCATTGTGATTGTTTTCATTATTTGTTATAGATTTTGCTTAGAGTATACACACAAGTAA 603 0.3814 MAAMRLLFNFLIVPFFLSTFVYAYSSNDVKHWCSQTPNPQPCEYFLSNNPNHQTKPINQKSDFLKISLQLAQERALIGHANTLSLGTKCRNQLERVAWNDCVDLYQQTIHKLNKTLDPNTKCSQVDAQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTELLSNTLALNIYIRKYFHFIVIVFIICYRFCLEYTHK 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02598 200 CDD PMEI-like_3 32 173 - -
Aip02g02598 200 PANTHER PECTINESTERASE 7 175 - -
Aip02g02598 200 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Aip02g02598 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 173 IPR035513 -
Aip02g02598 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 176 IPR035513 -
Aip02g02598 200 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 175 IPR006501 GO:0004857
Aip02g02598 200 SMART PMEI_2 24 172 IPR006501 GO:0004857
Aip02g02598 200 PANTHER PECTINESTERASE 7 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02598 Aip-Chr2 100800174 100800776 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02598 1 173 Carbohydrate Esterase AT2G45220 56.647 9.25e-69 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02598 K01051 - gmx:100781697 285.804