Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02589 ATGGCAGAAATGGGTTTATTATTCTCCAATTTTCTCATTGTTCTCTTCTTTCTATCAACTTTTGCTTATGGTTATTCTTCAAATGATGTTAAACATTGGTGTAGCCAAACCCCAAACCCTCAACCATGTGAGTATTTCTTGAGCAACTACCCTAATCACCAAACCAAACCTATTAACCAAAAAAGTGACTTTCTCAGGATTTCATTACAACTTGCTCAAGAGAGAGCACTCTTAGGCCATGCAAACACTGTTTCACTTGGCTCAAAGTGCCGCAACCAACTTGAAAGAGTTGCATGGAATGATTGTGTTAAGCTCTATCAACAAACCATTCATAAGCTCAACAAAATCCTAGATCCTAAAACCAAGTGCTCCAAAGTTGATGCTCAAACATGGCTTAGCACTGCTCTCACAAACCTTGAGACATGCCAAACTGGCTTCTATGAACTTGGTGTTCAAGACTCTCTTCTTCCTCTAATGTCCCACAATAATCTTACTAAGTTGCTAAGCAACCTTTTGGCTCTTAATAACAACGGTGAATCCCATCAAGAGCCAAGTTACAAAGATGGATTCCCAACATGGGTCAAGCCAGGTGATAAAAAATTGCTACAAGCATCTTCTCCAGCATCTCAAGCCAATGTGGTGGTGGCCAAAGACGGATCTGGAAAATACACAACAGTTATGGCAGCCATAAACGCAGCACCAAATAGTAGCAGCAGTGGAAGAAGGTATGTGATATATGTGAAGGCCGGGATTTACAACGAGCATGTTGAAATAGAGGCAAATAATATAATGTTGATCGGAGATGGTATCGGAAAAACCATAATTACCGATCAGCAAAGTGTTGGGGGAGGCAGAACAACTTATAGTTCAGCCACTGTTGGTATTATGGGAGCAGGATGTATTGCTCAAGGAATCACATTTAGGAACACTGCAGGTGCAGAAAATCGGCAAGCTGTTGCATTGCGTTCTGGATCTGACTTATCAGTTTTTTATCGATGCAGTTTTGAAGGTTATCAAGATACATTATTCACTTTCTCTGACAGACAATTCTATAGAGAATGTGACATTTATGGCACTGTTGACTTTATCTTTGGTAATGCTGTTGTGGTGTTTCAAAATTGCAACATATTTGTAAGAAACCATCCAAAAACAATTAACACAATCACTGCACAAGGAAGAACTGATGCAAAACAAAACACTGGAATTTCCATTGTCAATTGTGTGGTTACAGTAGCACCAGATTTGAAAGCAGTTCAAAGCTCTATGAAGGCATATCTTGGAAGGCCATGGCAAAAATATTCAAGAACAGTTTTCATGAAGAGTTATTTTGATAGCTTGATTGTTCCAGCAGGTTGGTTGGAATGGAATGGTGACTTTGCATTAAGTACTTTGTATTATGGAGAATACATGAACACAGGTCCTGGATCTTCAACCACAAACAGAGTTAAATGGGGAGGTTATCATGTCATAACCAATGCTGCTGAAGCTTCAAAGTTCACCGTTTCAAACTTCATTGCTGGCAACTCATGGCTACCATCCACCGGTGTGCCTTTCACCGCTGGTGCGGGCAACCGGTTTTCCTTCTTGCTTCTGGGTCAGTGGATCAAGGATCTGAAAGCCGAGCTTGCTTTGCTCTGTGTTGCCAAGGGCTTGTTTGGGTGTAAGAGAAAATGGAGAAGCAGGGCACTTGCTTATACTCATCAGCATGAAGATGGGTTTGAGGTGGTTGTTATTGGTCAAAGCTGA 1746 0.4089 MAEMGLLFSNFLIVLFFLSTFAYGYSSNDVKHWCSQTPNPQPCEYFLSNYPNHQTKPINQKSDFLRISLQLAQERALLGHANTVSLGSKCRNQLERVAWNDCVKLYQQTIHKLNKILDPKTKCSKVDAQTWLSTALTNLETCQTGFYELGVQDSLLPLMSHNNLTKLLSNLLALNNNGESHQEPSYKDGFPTWVKPGDKKLLQASSPASQANVVVAKDGSGKYTTVMAAINAAPNSSSSGRRYVIYVKAGIYNEHVEIEANNIMLIGDGIGKTIITDQQSVGGGRTTYSSATVGIMGAGCIAQGITFRNTAGAENRQAVALRSGSDLSVFYRCSFEGYQDTLFTFSDRQFYRECDIYGTVDFIFGNAVVVFQNCNIFVRNHPKTINTITAQGRTDAKQNTGISIVNCVVTVAPDLKAVQSSMKAYLGRPWQKYSRTVFMKSYFDSLIVPAGWLEWNGDFALSTLYYGEYMNTGPGSSTTNRVKWGGYHVITNAAEASKFTVSNFIAGNSWLPSTGVPFTAGAGNRFSFLLLGQWIKDLKAELALLCVAKGLFGCKRKWRSRALAYTHQHEDGFEVVVIGQS 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02589 581 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 177 IPR035513 -
Aip02g02589 581 PANTHER PECTINESTERASE 6 521 - -
Aip02g02589 581 Gene3D - 207 522 IPR012334 -
Aip02g02589 581 SUPERFAMILY Pectin lyase-like 206 521 IPR011050 -
Aip02g02589 581 SMART PMEI_2 25 174 IPR006501 GO:0004857
Aip02g02589 581 ProSitePatterns Pectinesterase signature 2. 356 365 IPR033131 -
Aip02g02589 581 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 177 IPR035513 -
Aip02g02589 581 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 177 IPR006501 GO:0004857
Aip02g02589 581 CDD PMEI-like_3 33 166 - -
Aip02g02589 581 Pfam Pectinesterase 212 508 IPR000070 GO:0030599|GO:0042545
Aip02g02589 581 Pfam Plant invertase/pectin methylesterase inhibitor 29 174 IPR006501 GO:0004857
Aip02g02589 581 ProSitePatterns Pectinesterase signature 1. 239 258 IPR018040 -
Aip02g02589 581 PANTHER PECTINESTERASE 6 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02589 Aip-Chr2 100725513 100728488 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02589 10 521 Carbohydrate Esterase AT2G45220 61.523 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02589 K01051 - gmx:100781697 769.229