Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02584 ATGTCACCTTTTCATTCCCTTGTAATACTCTTGATTCCTTTCCTACTTTCCTCCATTGTTACTTCATATTCATATAATGACCTTAAACTTTGGTGTGGCCAAACACCTAATCCTCAACCATGTGAGTATCTCTTGAGCAAAAACCCTAATCACTTGCACAAACCCATTAAGCGAAAATCTGATTTTCTCAAGCTTTCATTGCAACTTGCTCAAGAGAGAGCACTCATAGGACATGCAAACACTGTTTCACTTGGCTCAAAGTGCCGCAACCAACTTGAAAGAGTTGCATGGAATGATTGTGTTGACCTCTATCAACAAACCATTCAAAAGCTCAACAAAACCCTAGACCCTAACACCAAATGCTCCCAAGTTGATGCCCAAACATGGCTTAGCACTGCTCTCACAAACCTTGAGACATGCAAAGCTGGCTTCTATGAACTTGGTGTTCAAGACTATGTCCTTCCTCTAATGTCCAACAATGTTACTAAGTTGCTAAGCAACACTTTGGCTCTTAACAACAATGGTGAATCTCATCAAGAACCAAGTTACAAAGATGGATTCCCAACATGGGTCAAGCCCGGTGATAGAAAATTGTTGCAAGCATCTTCTCCGGCTTCTAGGGCTAATGTAGTGGTAGCTAAAGATGGATCTGGAAAATACACCACAGTGAATGCTGCCATAAATGCTGCACCAAAGAATAGCAATGGAAGGTATGTGATATATGTGAAGGGTGGGATATACAATGAGCAAGTTGAAATAAAGACAAAGAATATAATGTTGGTCGGAGATGGTATTGGAAAAACCATAATCACGGGCAGCCAAAGTGTGGGAGGAGGCACCACAACCTTCCGTTCCGCCACCGTTGCTATTACTGGAGATGGATTCATTGCTCAAGATATCACATTCAGAAACACTGCTGGAGCAGCAAATCATCAAGCTGTGGCACTACGTTCTGGATCAGATCTCTCAGTGTTCTACAGATGTGGATTTGAAGGTTATCAAGACACATTATATGTATACTCAGATAGACAATTCTACAGAGAATGTGACATTTATGGAACCGTTGACTTTATCTTTGGTAATGCGGCAACGGTTTTACAAAACTGTAACATTTATGCAAGAAACCCTCCTCAAAAGACAATCACAGTAACTGCTCAAGGTAGAACTGATCCAAACCAAAACACAGGAATCATCATCCATAATTCAAAGATCACAGCTGCCTCAGGCCTAAACCCTAGCTCAGTGAAATCATATCTTGGAAGGCCATGGAAGCAATACTCAAGAACCGTGGTGATGAAGACTTATCTTGATAGTTTGATTAACCCAGCAGGGTGGATGGAATGGAGTGGTAACTTTGCATTGAACACTTTGTATTATGCTGAGTATGCAAATACAGGTCCTGGTTCTTCTACTTCAAATAGGGTTTCATGGAAGGGTTACCATGTCCTTACTAGTGCTTCTCAAGCTTCACCTTTCACTGTTGGAAACTTTCTTGCTGGAAATTCATGGTTGCCAAGCACTGGAGTCCCTTTTACCTCCGGTCTGGTTGGTAATGATAATGCGGGTGATGATGAGATTACTAATGATGCTGGTGTTGATGAGATTACTAATGAGATTGCTGATGTGGGTGTTAATGATGCGGGTGTTGATGAGATTACTAACGAAGTTGCTGATGCCAATAACGAGATTTGTGACGAAGATGTTGAGGTTGAGAGGCTATTGAATCTTTCACACCCGAGTGATGTTTTCATTATATTCATTCCTGTGCTGGTTGCTATTCTTTCACTTCATTTTGAATTTGAAAATAAGGATGAAGCTCCTTCGGACTCACCCATTGGAATTCCAAACATTTGTGGTTTTTCTTTGGATATACTGTGGATTACTTGGTACTTGCCATTAGGATGTCCAAAAAAGAAGCTAGAATAG 1926 0.4091 MSPFHSLVILLIPFLLSSIVTSYSYNDLKLWCGQTPNPQPCEYLLSKNPNHLHKPIKRKSDFLKLSLQLAQERALIGHANTVSLGSKCRNQLERVAWNDCVDLYQQTIQKLNKTLDPNTKCSQVDAQTWLSTALTNLETCKAGFYELGVQDYVLPLMSNNVTKLLSNTLALNNNGESHQEPSYKDGFPTWVKPGDRKLLQASSPASRANVVVAKDGSGKYTTVNAAINAAPKNSNGRYVIYVKGGIYNEQVEIKTKNIMLVGDGIGKTIITGSQSVGGGTTTFRSATVAITGDGFIAQDITFRNTAGAANHQAVALRSGSDLSVFYRCGFEGYQDTLYVYSDRQFYRECDIYGTVDFIFGNAATVLQNCNIYARNPPQKTITVTAQGRTDPNQNTGIIIHNSKITAASGLNPSSVKSYLGRPWKQYSRTVVMKTYLDSLINPAGWMEWSGNFALNTLYYAEYANTGPGSSTSNRVSWKGYHVLTSASQASPFTVGNFLAGNSWLPSTGVPFTSGLVGNDNAGDDEITNDAGVDEITNEIADVGVNDAGVDEITNEVADANNEICDEDVEVERLLNLSHPSDVFIIFIPVLVAILSLHFEFENKDEAPSDSPIGIPNICGFSLDILWITWYLPLGCPKKKLE 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02584 641 SUPERFAMILY Pectin lyase-like 203 514 IPR011050 -
Aip02g02584 641 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
Aip02g02584 641 Pfam Plant invertase/pectin methylesterase inhibitor 28 171 IPR006501 GO:0004857
Aip02g02584 641 PANTHER PECTINESTERASE 7 514 - -
Aip02g02584 641 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 174 IPR035513 -
Aip02g02584 641 ProSitePatterns Pectinesterase signature 1. 234 253 IPR018040 -
Aip02g02584 641 CDD PMEI-like_3 30 174 - -
Aip02g02584 641 Pfam Pectinesterase 209 501 IPR000070 GO:0030599|GO:0042545
Aip02g02584 641 PANTHER PECTINESTERASE 7 514 - -
Aip02g02584 641 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 174 IPR035513 -
Aip02g02584 641 Gene3D - 204 515 IPR012334 -
Aip02g02584 641 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 174 IPR006501 GO:0004857
Aip02g02584 641 SMART PMEI_2 23 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02584 Aip-Chr2 100638085 100674475 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02584 1 515 Carbohydrate Esterase AT2G45220 66.089 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02584 K01051 - gmx:100781697 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02584 02 100638085 100674475 Aip02g02584 02 100638085 100674475 ECH