Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02560 ATGGTGTCCCCCCTGCTCTTAATTCTATTCCTAACTCTTCCTTTCTCATTGTTTCTCTTCTTCTTTCAAAAACAAAAGAACAAAGCCTTTCCACCAGGTCCTAAAGGCCTTCCAATAATTGGAAACCTTCACCAATTTCATTTTCCTACCCTTCATATTCAACTATGGAAGCTCTCAAAATTATATGGTCCTTTGTTCTCAATCAAACTAGGTTTAAGGCCATGTCTTGTTGTATCCAATTCCAAAATGGCCCAAGAAGTGTTGAAAACTCATGACATTGAATTTTGTGGAAGGCCTTCTTTTCTTGCCCAAAACAAAATTTCCTACAATAGGATTGAAATTGCATTTTCAGCATACAATGATTCTTGGAAAGCAATCAAGAAAATTTGTATTACCCATTTCCTCAATTCAAGTAGTGTCTCCAAATTCTCCTCTATACGCCAATTTGAGGTGAATCAAATGATCAAGGAGATATCAATACAAGCTTCTTCTAAAAGTGTGACAAATTTGAATGATGCAATTTTGTCACTTACCAACACTATAATTTATAGAATTGCTTTTGGAAGAAGCTATAAAGATGATAAAGGAATTATTGTTGCTAAGAGGTTACTTGGTTTGCTTAATGAATCTCAAGCTTTGTTAGGAGCATTCTTTGTTTCTGATTATGTTCCATTCATGGGGTGGATTGATAAACTTAGAGGTATGCATTCTCTTCTTGAAAGAAGTTGTCAGAAATTTGATGCATTCTTGCAAGAAATTGTCAACCAACACCTTGATCCAAAGAGACAAAAATCTGATGACGAAGAAGAAGAAGAAAATGTCATTGATGTCTTATTGAAGCTGAAGAATAATAAGGAGCAGTCATTTCCATTTGATCTCACTTATGATCACATCAAAGCTGTGCTAATGGACATACTTATTGGAGGGACATATTCAAGTGCTGCCACATCAACTTGGGCCATGGCCAATCTAATGAAGAACCCTAAAGCAATGATGAAGGTTCAAGAAGAAGTTAGAAACTTCTTTGGAAGCAAAGGCTTTGTTGATGAAGATGAAATAAGAAATAATAATAATAATGTTCTACCTTATCTTAAGGCAGTGATAAAAGAGACACTTAGATTAGTGCCACCATTACCACTATTATTAACAAGAGAAACAAATGAAGCATGCAAAATAGGAGAATATGAAATTGAAGCCAAGACATTAGTGTATGTTAATGCATGGGCAATTCAAAGGGATCCTGAAATTTGGAAAGACCCAGAAGAGTTTTATCCTGAGAGATTCTTGAAAAGTTCAATTGATTTTAAGGGTCAAGATTTTGAGCTGATTCCATTTGGTTCTGGAAGGAGAATTTGCCCTGGATTGAATATGGGAGTTGCAACGGTGGAGATTATTGTTGCTAATCTTCTTTTTTGGTTTGATTGGGAGATTCCAATTGGGATGGAAGACTTGGATAATAATGAAGTCAAACCAGGGATTGTTCATAGCAAAAAGAATCCTCTTTATCTTAGGGCCAAGAATTATTATCATATGGGAGTAATTAATGAATGA 1551 0.352 MVSPLLLILFLTLPFSLFLFFFQKQKNKAFPPGPKGLPIIGNLHQFHFPTLHIQLWKLSKLYGPLFSIKLGLRPCLVVSNSKMAQEVLKTHDIEFCGRPSFLAQNKISYNRIEIAFSAYNDSWKAIKKICITHFLNSSSVSKFSSIRQFEVNQMIKEISIQASSKSVTNLNDAILSLTNTIIYRIAFGRSYKDDKGIIVAKRLLGLLNESQALLGAFFVSDYVPFMGWIDKLRGMHSLLERSCQKFDAFLQEIVNQHLDPKRQKSDDEEEEENVIDVLLKLKNNKEQSFPFDLTYDHIKAVLMDILIGGTYSSAATSTWAMANLMKNPKAMMKVQEEVRNFFGSKGFVDEDEIRNNNNNVLPYLKAVIKETLRLVPPLPLLLTRETNEACKIGEYEIEAKTLVYVNAWAIQRDPEIWKDPEEFYPERFLKSSIDFKGQDFELIPFGSGRRICPGLNMGVATVEIIVANLLFWFDWEIPIGMEDLDNNEVKPGIVHSKKNPLYLRAKNYYHMGVINE 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02560 516 Pfam Cytochrome P450 31 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PANTHER CYTOCHROME P450 71B11-RELATED 5 507 - -
Aip02g02560 516 SUPERFAMILY Cytochrome P450 31 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 Gene3D Cytochrome P450 22 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 507 - -
Aip02g02560 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Aip02g02560 516 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip02g02560 516 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02560 Aip-Chr2 100209080 100213176 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02560 5 503 Cytochrome P450 AT4G31500 43.452 4.18e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02560 - - gmx:100801312 577.785