Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02558 ATGTTGATACCTGCTCCTTCTTCTTCTTCTAAACAACATCATGACAATGGTGGTGGTCTTCCTCGGTGGCTGCAAGTGCTTCTAACAGAGAAGTTCTACAACGCTTGCATAGTTCATGAAGAAGCAAAGAAGAATGAGAAGAACGTTTATTGCTTGGATTGTTGCATCACTCTCTGCCCTCACTGTTTAGCCCCACATCGCTCTCACAGACTCTTGCAGATTAGAAGGTATGTGTACCACGATGTTATAAGGTTGGATGATGCTGCAAAGTTAATTGACTGCACTTCTGTTCAATCATACACAACGAACAGTGCAAAAGTGGTGTTTATAAAAGAAAGGGCACAGACAAGGAACTTTAGGGGTAATTCCGGCAATTCGTGCAGTACTTGCGACAGAACCCTGCAAGACCCATATCAATTCTGCTCTCTCTCTTGCAAGATCAACTATCTTATTGGAAGTAGGGGTAGTCTCTCCGGGTACCTATATGAGTGCAACTATTTGCCCTTCAATGAAACCGGGTTTGATGATGGTCAATTGACAACTGACTCGGTTCTTGAACCGGCTGGTTCAGTTTGGACCTCATCCGGTTCAGGTGGATGTGTTGGTGGGGTTGATTGTAAGACCACCCTTGCTTGCACTGCCACCACAGAAATTGTGAGAAAAAAGCGAAGTTCCGGTTCGGCTAGTCGTCCAACCGCACCGGTTTGTCGACCGGTTCATGACATTTTGGTTGGTCTTCCGAACCGGAGGAAAGGGACCCCACAGAGGGCCCCTCTTTATTAA 783 0.461 MLIPAPSSSSKQHHDNGGGLPRWLQVLLTEKFYNACIVHEEAKKNEKNVYCLDCCITLCPHCLAPHRSHRLLQIRRYVYHDVIRLDDAAKLIDCTSVQSYTTNSAKVVFIKERAQTRNFRGNSGNSCSTCDRTLQDPYQFCSLSCKINYLIGSRGSLSGYLYECNYLPFNETGFDDGQLTTDSVLEPAGSVWTSSGSGGCVGGVDCKTTLACTATTEIVRKKRSSGSASRPTAPVCRPVHDILVGLPNRRKGTPQRAPLY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02558 260 PANTHER - 21 260 - -
Aip02g02558 260 Pfam PLATZ transcription factor 75 147 IPR006734 -
Aip02g02558 260 ProSiteProfiles Zinc finger B-box type profile. 31 74 IPR000315 GO:0008270
Aip02g02558 260 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 21 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02558 Aip-Chr2 100180889 100182833 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aip02g02558 PLATZ 6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02558 - - pvu:PHAVU_008G142900g 402.905