Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02552 ATGCCCTTTCCTTCTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTTCTTATTGTTCTGCAACAGATCTGTTCTCACTGCTTCAGCATCAACAGCAACTTGTTAATAATCATAGTATCCATCAGCCACCACCACCATCACAAGAAGGAAAGTGGAGGAGAAGGGAAGAAGAAGAAGAAGAAGAAGAAGAGAATAAAGGCTATGTGGGCTGCACTGAGCCCACATCTGTTCTTGACTCAAGAAGAAGCCAAAGCCCTCCTTCATCCTCCTGCACAATGTCCTCTTCTCTTGGTAGCAGCAACAACAGCACAAGCAAAGGTAGTGCTGCTGCTGGTGGTGGTGGTGGCTGCTCAGCCTCTGCTGCAGCACTAGCCTCAGAGAATCCTCCTCCTCCTCCAGAAGGATCCATGGAGAAATGTGGTGGGGCAAGAATGATGGATGACTGGGAGGGTCAAGATCAGTCCATTCTGAGGCTAATCATGGGTGATGTTGAGGACCCTTCTGCTGGTTTGACCAAGCTCTTGCAAACTGGCTCTCGTAATGTTGATTTTAGTTCTTCAGGGTTTGGTGTTGTGGAGCAAGGAGGATTGGTTATGGACCCTTCTATGCCTGGGAATTACCCTGCTTTCCCATTCCTTGGGGCTGAGAATATGGAGAGTCACAATGCAAAGAATGGTTATGGTGTTTCTGAACCCATGTTTGCTTCCTGTAACAATCCTATGTTGGTGTCCTCGGCTCCGACTTCGGGTGTGTTCGGCTTTCAGCAGCCTGTGTTTGGAACCGTGGATGAGAAGCCTCAGGTTATCAACCCTCAGTTTATGATGAATCATAATCAAGTTCAGTTTTCAGAGAATCCTTCATTCTTTGTGCCATTGACATACCCCCAAATGCAAGAGCAGCATATTGTTTACTCTCAGCAACCGGCGAAGCGTGCTGCGGTCGGGCACAATTATCAGGTGCCGAGATTACCCCTTTTGGATTCGGGGCAGGAGCAATTCGCCAGGAGGCAGCAACAGGCGCAGCTTCCATTGTTTCCTCATCATCTGCAGCATCAGCAGAAGGTGAGTTCAGCCGGAGACGAGGCAAGCAACCAGCTTCAGCAGACTATGTTTGATCAGCTATACAAGACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCCATTGGCAAGCCTTTTCAGAGGGCTGCCCTCTACATGAAGGAGGCATTGCAACTACTGCTCCATTCAAACATTCCCAATTTCATGCCTTTCTCGCCCATCGGCTTCATATTCAAGATTGGAGCTTACAAATCATTCTCAGAGATCTCACCTGTTCTCCAGTTTGCAAACTTCACTTCCAATCAAGTCCTCATCGAAGCTGTAGAACGGTTCGATCGAATTCACATTATTGACTTTGATATTGGGTTTGGAGTGCAGTGGTCTTCCTTTATGCAAGAGCTTGCCTTGAGAAATAGCAATGCATCTTCTCTTAAAGTTACTGCCATAGTTTCGCCTTCGAATTGTGACGAGGTTGAGCTCAATTTCACAAGAGAGAATTTAAGTCAGTATGCAAAAGACATCAACTTATCATTTGAGCTCAATATCTTGAACATTGAATCATTGAGCTCTCCTTCCTTTCCACTGGCAAGTCAGTTCTTCGATAGCGAGGCAGTTGCTGTAAATATGCCGCTTTCTTGTTTCACTCATCATCCGTCGCTGGTTCCATCTGTCCTTCATTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTGGACCGAAATTGTGACCGAATCGATGTGCCACTTCCAACCAAAGTAGTCCATGTTCTTCAATATTACTCAGCCTTGCTCGAATCGCTTGACGCCGTGAATGTGAACCTCGACGTCCTCCAAAAGATTGAGAAGCATTTCATCCAACCATCCATTAGGAATGTGATCACAGGTCACCACCATTACCATTCACAAGAGAAGCTACCTCATTGGAGGAACCTCTTTGTTCAATCTGGATTCTCATCATTCACATTCAGTAACTTCACAGAAGCTCAAGCAGAATGTCTGGTGCAGCGTGCGCCGGTGCGAGGGTTTCAGGTCGAGAGAAACCATTCGTCTCTTGTTCTATGCTGGCAGCGAAAAGACCTGGTCTCCATTTCGAGTTGGAGATGCTAA 2199 0.4688 MPFPSEEFQGKGVLDFSSSYCSATDLFSLLQHQQQLVNNHSIHQPPPPSQEGKWRRREEEEEEEEENKGYVGCTEPTSVLDSRRSQSPPSSSCTMSSSLGSSNNSTSKGSAAAGGGGGCSASAAALASENPPPPPEGSMEKCGGARMMDDWEGQDQSILRLIMGDVEDPSAGLTKLLQTGSRNVDFSSSGFGVVEQGGLVMDPSMPGNYPAFPFLGAENMESHNAKNGYGVSEPMFASCNNPMLVSSAPTSGVFGFQQPVFGTVDEKPQVINPQFMMNHNQVQFSENPSFFVPLTYPQMQEQHIVYSQQPAKRAAVGHNYQVPRLPLLDSGQEQFARRQQQAQLPLFPHHLQHQQKVSSAGDEASNQLQQTMFDQLYKTAELIEAGNPVLAQGILARLNHQLSPIGKPFQRAALYMKEALQLLLHSNIPNFMPFSPIGFIFKIGAYKSFSEISPVLQFANFTSNQVLIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSNASSLKVTAIVSPSNCDEVELNFTRENLSQYAKDINLSFELNILNIESLSSPSFPLASQFFDSEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLDRNCDRIDVPLPTKVVHVLQYYSALLESLDAVNVNLDVLQKIEKHFIQPSIRNVITGHHHYHSQEKLPHWRNLFVQSGFSSFTFSNFTEAQAECLVQRAPVRGFQVERNHSSLVLCWQRKDLVSISSWRC 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02552 732 Pfam GRAS domain family 374 731 IPR005202 -
Aip02g02552 732 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 67 731 - -
Aip02g02552 732 ProSiteProfiles GRAS family profile. 363 731 IPR005202 -
Aip02g02552 732 MobiDBLite consensus disorder prediction 78 111 - -
Aip02g02552 732 MobiDBLite consensus disorder prediction 39 146 - -
Aip02g02552 732 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 67 731 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02552 Aip-Chr2 100079612 100081810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02552 374 732 GRAS Transcription Factor Family AT4G00150 54.017 8.60e-124 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip02g02552 GRAS 2.4e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02552 - - aip:107625898 1207.2