Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02551 ATGAAGGCGATGCCCTTTCCTTCTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCTTCTTATTGTTCTGCGACAGATCTGTTCTCACTGCTTCAGCATCAACAGCAACTTGTTAATAATCATAGTATCCATCAGCCACCACCACCACCACAAGAAGAAGAAGAAAAGTGGAGGAGACGGGAGGAAGAAGAAGAAGAAGAGAACAAAGGCTATGTGGGCTGCACTGAGCCCACATCTGTTCTTGACTCAAGAAGAAGCCAAAGCCCTCCTTCATCCTCCTGCACAATGTCCTCTTCTCTTGGTAGCAGCAACAACAGCACAAGCAAAGGTAGTGCTGCTGGTGGTGGTGGTGGTGGCTGCTCAGCCTCTGCTGCAGCACTAACCTCAGAGAACCCTCTTCCTCCTCCTCCAGAAGGATCCATGGAGAAATGTGGCGGTACAAGAATGATGGATGACTGGGAGGGTCAAGATCAGTCCATTCTGAGGTTAATCATGGGTGATGTTGAGGACCCTTCTGCTGGTTTGACCAAGCTCTTGCAAACTGGCTCTCACAATGTTGATTTCAGTTCGGGAGGGTTTGGTGTTGTGGATCAAGGAGGCTTGATTATGGACCCTTCTGTGCCAGGGAATTATCCTGCTTTCCCATTCCTTGGGGCCGAGAATACGGATGGTCACGTTGCAAAGACCGGTGGGGTTGCTGAACCCATGTTTTCATCCGGTAACAATCCTATGTTAGCCTCCACATCTCCAGCTGCAGGTGTGTTTGGCTCTCAGCAGCCTGTGTTTGGAATTGTGGATGAGAAGCCTCAGGTTATCAACCCTCAGTTTATGATGAATCATAATCAAGTTCAGTTTTCAGAGAATCCTTCATTCTTTGTGCCATTGACATACCCCCAAATGCAAGAGCAACATGTTGTTTACTCTCAGCAACCAGCGAAGCGCCCTCTTTCCGATGCAGCCGTCGGTCACAATTATCAGGTGCCGAGATTACCCCTTTTGGATTCGGGGCAGGAGCAATTTGCTAGGAGGCAGCAGCAGGCCCAGCTTCCTTTGTTTCCTCATCATAGTCAGCAGCAGAAGGTGAGTTCTGCCGGAGACGAGGCGAGCAACCAGCTTCAGCAGGCTATGTTTGACCAGCTTTACAAGACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCTTGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCGATCGGCAAGCCTTTTCAAAGGGCTGCTCTCTACATGAAGGAGGCATTGCAACTACTGCCCCATTCAAACATCTCCAATTTAACGGCTTTCTCACCTATCAGTTTCATATTCAAAGTTGGAGCTTATAAATCATTTTCAGAGATATCACCGGTTCTCCAGTTTGCAAACTTCACCTCTAATCAAGCCCTCATCGAAGCTGTAGAAAGGTTCGATCGAATTCACATTATTGACTTCGATATTGGGTTTGGAGTGCAGTGGTCTTCTTTTATGCAAGAGCTTGCCTTGAGAAATAGCGGTGCATCTTCTCTTAGAGTTACTGCCGTGGTATCGCCCTCAACCTGCGATGAGGTTGAGCTCAGTTTTACAAGAGAGAATTTAAGTCAATATGCAAAAGACATCAACTTATCATTTGAGCTCCATATCTTGAACATCGAATCATTGAGCTCTCCGTCCTTTCCCCTGGCCGGTCAATTCTTCGATAACGAGGCAGTTGCTGTAAATATGCCACTTTCTTGTTTCACTCATCATCCATCGCTGGTTCCATCGGTCCTTCACTTTGTCAAGCAGCTTAGGCCAAAAGTGGTGGTTACTTTGGGCAGGAATTGTGACCGAAACGATGTGCCTCTTCCAACCAAGGTAGTCCATGTTCTTCAATATTACTCGGCCTTGCTCGAGTCGCTTGATGCTGTGAATGTGAACCTAGATGTCCTCCAAAAGATTGAGAAGCACTTCATCCAACCATCTATTAGAAAAGTAATCGTGGGTCACCACCATTATCATTCACAAGAAAAGCTACCTCATTGGAGGAACCTCTTTGCTCAATCAGGATTCTCATCGTTCACATTCAGTAACTTCACAGAAGCTCAAGCAGAATGTCTGGTGCAGCGTGCGCCCGTGCGGGGATTTCAAGTGGATCGAAATCATTCCTCTCTTGTTCTATGCTGGCAGCGAAAAGACCTCGTGTCCGTCTCGCTTTGGAGATGCTAA 2217 0.4745 MKAMPFPSEEFQGKGVLDFSSSYCSATDLFSLLQHQQQLVNNHSIHQPPPPPQEEEEKWRRREEEEEEENKGYVGCTEPTSVLDSRRSQSPPSSSCTMSSSLGSSNNSTSKGSAAGGGGGGCSASAAALTSENPLPPPPEGSMEKCGGTRMMDDWEGQDQSILRLIMGDVEDPSAGLTKLLQTGSHNVDFSSGGFGVVDQGGLIMDPSVPGNYPAFPFLGAENTDGHVAKTGGVAEPMFSSGNNPMLASTSPAAGVFGSQQPVFGIVDEKPQVINPQFMMNHNQVQFSENPSFFVPLTYPQMQEQHVVYSQQPAKRPLSDAAVGHNYQVPRLPLLDSGQEQFARRQQQAQLPLFPHHSQQQKVSSAGDEASNQLQQAMFDQLYKTAELIEAGNPVLAQGILARLNHQLSPIGKPFQRAALYMKEALQLLPHSNISNLTAFSPISFIFKVGAYKSFSEISPVLQFANFTSNQALIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSGASSLRVTAVVSPSTCDEVELSFTRENLSQYAKDINLSFELHILNIESLSSPSFPLAGQFFDNEAVAVNMPLSCFTHHPSLVPSVLHFVKQLRPKVVVTLGRNCDRNDVPLPTKVVHVLQYYSALLESLDAVNVNLDVLQKIEKHFIQPSIRKVIVGHHHYHSQEKLPHWRNLFAQSGFSSFTFSNFTEAQAECLVQRAPVRGFQVDRNHSSLVLCWQRKDLVSVSLWRC 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02551 738 MobiDBLite consensus disorder prediction 42 148 - -
Aip02g02551 738 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 737 - -
Aip02g02551 738 Pfam GRAS domain family 380 737 IPR005202 -
Aip02g02551 738 MobiDBLite consensus disorder prediction 50 73 - -
Aip02g02551 738 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 737 IPR005202 -
Aip02g02551 738 ProSiteProfiles GRAS family profile. 369 737 IPR005202 -
Aip02g02551 738 MobiDBLite consensus disorder prediction 81 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02551 Aip-Chr2 100042723 100045816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02551 380 738 GRAS Transcription Factor Family AT4G00150 53.463 1.31e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip02g02551 GRAS 1.6e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02551 - - aip:107625898 1331.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02551 02 100042723 100045816 Aip02g02551 02 100042723 100045816 ECH