Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02526 ATGAGGGCTCATGGAATAGGAGATGAATCAGGTCACATGGATGATGATGACCCAGCAAGTGATTGGGAAGATAGGCTTGGTGGAAATGTTCCACCAAGCAACAAGCGCATGTATGCTCTTAGAACAAACCCTAATAGGTTAAAGAGTTGTAGGGTGTGTGAAAATTGTGGCAAGGAGTTTTTGTCTTGGAAATCCTTTCTTGAGCACGGTAAATGCACCTCCGAGGACGCAGAGTCCCTCGTATCCTCTCCAGGGTCCGATGCTGCTGATGATGGCATCGAACCTACCAGGAGAGGATGCGGGTGGTCCAAAAGAAAGAGGTCGTTAAGAGCAAAAGTGGGTAGCTTCAATTACAATTGCCCCTCAAGCGAAGAGGAAGACCTAGCGAATTGCTTAATGATGTTGTCCAATGCGATTGTGGACCCTCTGACGTCAGCCGCGGCCGAGCCAGAAGAGTCTTGCGCCTCGGCGAGCAGAGAGGAGGAGCAAAGAAGAAACCCTATGAACTTTGTTGCACCATTCTCTTCTTATAAAGTTCCAAACAACGATAACAACAATAACAATAACAACAAGGCCAAAGGTGTTGCTAAGGGTTTGTTTGAATGCAAAGCGTGCAAGAAGGTTTTCAACTCGCACCAGGCGTTGGGTGGCCACAGAGCTAGCCACAAGAAGGTTAAGGGCTGCTTTGCGGCGAGGCTGGACAATCTGGACGACAGCCTCGCCGACGATGACGTCATGACACACGAAGAATTCTTCCCTACAAAATCAAACTCAACATTCCAATTTGATCAAAACCCTCACCATAACTCAGCCACATTGGCCTCATCATCAAAGAGGAAATCAAAGGTTCATGAATGCTCCATTTGCCATAGAAGCTTCTCCTCAGGACAAGCATTGGGAGGCCACAAAAGGTGCCATTGGATCACATCAAATGCACCGGACACTTCCACATTGGCTAGGTTTCAACAATTTCAGGAACATTTGGATCAAATACCAAAGTTTGATGGATCTTCTGAGCCTCTTGATCTCAAACTTGACCTCAACCTTCCTGCACCAACCAATGATCTTTCTAGAAGGAATAACAATGTTAATGTTTCCACAGAAATCTTCTTGCAGCCATGGGTAGGAGGAGCAGGAGGAGGAACCGCCACAAAGGAAAACAATACAAACATGAAAGATGATAGCAACAATAATAACAACAATAGCCAGAGTCAAATTAGTCACCAGCACCCCACCAACCATAACCAAATTGATCATAATGAAAATGTTGGTGTTGATGGGGACAAGAATAATAGTAACCCCAACAACAACAACAACAATAACAATGATTTGATGCAAAGTGTGGATAATGAAGCTGATAGTAAGATCAAGCTAGCAAAACTTAGTGAGCTAAAGGATATGAACATTGGTGGCACTTCTTCACCATGGTTGCAGGTATTTGTGCGACGGTTGTACAGTAATTCCAAAAGTCTCCCAAGCTTCCACAGAATCTGTACACATCCAGATGCAATGAACGACTGTTTCCTCTGCCAAGTTGCATCTGGAGCAAAGTGGGTTAACACTCGGAATTCGTTCATGGAGTTTCTGTTTAACAGGGAGGTATTCGACTGGTGGGTGGTTAAACTGAAATGTCGTCTGGTAGCCGGTTGCAACTGA 1656 0.4505 MRAHGIGDESGHMDDDDPASDWEDRLGGNVPPSNKRMYALRTNPNRLKSCRVCENCGKEFLSWKSFLEHGKCTSEDAESLVSSPGSDAADDGIEPTRRGCGWSKRKRSLRAKVGSFNYNCPSSEEEDLANCLMMLSNAIVDPLTSAAAEPEESCASASREEEQRRNPMNFVAPFSSYKVPNNDNNNNNNNKAKGVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNLDDSLADDDVMTHEEFFPTKSNSTFQFDQNPHHNSATLASSSKRKSKVHECSICHRSFSSGQALGGHKRCHWITSNAPDTSTLARFQQFQEHLDQIPKFDGSSEPLDLKLDLNLPAPTNDLSRRNNNVNVSTEIFLQPWVGGAGGGTATKENNTNMKDDSNNNNNNSQSQISHQHPTNHNQIDHNENVGVDGDKNNSNPNNNNNNNNDLMQSVDNEADSKIKLAKLSELKDMNIGGTSSPWLQVFVRRLYSNSKSLPSFHRICTHPDAMNDCFLCQVASGAKWVNTRNSFMEFLFNREVFDWWVVKLKCRLVAGCN 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02526 551 Pfam C2H2-type zinc finger 283 308 - -
Aip02g02526 551 Pfam C2H2-type zinc finger 200 224 - -
Aip02g02526 551 ProSitePatterns Zinc finger C2H2 type domain signature. 286 306 IPR013087 -
Aip02g02526 551 SMART c2h2final6 284 306 IPR013087 -
Aip02g02526 551 SMART c2h2final6 200 222 IPR013087 -
Aip02g02526 551 MobiDBLite consensus disorder prediction 1 37 - -
Aip02g02526 551 PANTHER OS02G0659100 PROTEIN 1 483 - -
Aip02g02526 551 PANTHER OS02G0659100 PROTEIN 1 483 - -
Aip02g02526 551 MobiDBLite consensus disorder prediction 1 23 - -
Aip02g02526 551 ProSiteProfiles Zinc finger C2H2 type domain profile. 200 227 IPR013087 -
Aip02g02526 551 MobiDBLite consensus disorder prediction 77 99 - -
Aip02g02526 551 MobiDBLite consensus disorder prediction 382 446 - -
Aip02g02526 551 ProSitePatterns Zinc finger C2H2 type domain signature. 202 222 IPR013087 -
Aip02g02526 551 ProSiteProfiles Zinc finger C2H2 type domain profile. 284 306 IPR013087 -
Aip02g02526 551 MobiDBLite consensus disorder prediction 374 446 - -
Aip02g02526 551 SUPERFAMILY beta-beta-alpha zinc fingers 199 306 IPR036236 -
Aip02g02526 551 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02526 Aip-Chr2 99460963 99464622 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02526 104 349 C2H2 Transcription Factor Family AT1G02040 33.463 2.88e-31 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip02g02526 zf-C2H2_6 1.8e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02526 - - ahf:112720137 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02526 02 99460963 99464622 Aip02g02526 02 99460963 99464622 ECH