Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02517 ATGAACATCCGGCGACGGGAAGAGAAGGCACAAACCGGCTGCGACAGAGGCACTGGACGTCCGGGTTGCTGCGGTGCCGCGAGCTCGACTCACACAATATACGCGTCCTCCCTACGTACGGTGGCCTGTGCGGACAACGACGACAGTCGGAAGAGTGTCGGCGCGATGTCCGACGGCGGCTGCACTACTTGCTATTGCATCAACCCCAAATTTTTCAATCCTTCAAAAGTTCCAAATGATGAAAAACCATGGGACCAAACACAAGCTACATGGTATGGAACGCCGGACGGAGCTGGATCAGAGAGTGGTGCATGTAAATATGGTAAAACTGTGGAGAATCCTCCAATCTCTAAATTGACGGCGGCTGCTGGCCATTATATTTTCCGCCAGGGCTATGGATGTGGTGCTTGTTATGAGGTGAAATGCACAGATAATCCAGCATGTTCAGGGAAGTCAGTGACAGTGGTGGTAAGTGATGAATGCCCATGGTGTTCGGGATACCATTTCAATCTCAGTGGCGCCGCTTTTGCTTCCCTCGCAAATCCAAGTCAACAAGATACTCTTCGCAAACTTGGACAAGTCAACCTTCAATACAGAAGCGTGGAAGAGATGACTACTGACAAGAGAGGAGCAGTGCGAGTAAAGACAACTAGCCAGGAGGAGCAACCTAATCCAGGACCTCCTGCAAAGGAAGAGAAGCATGAACGAGGACCATCCCGTCCGAGCATGTCTTCCGATGCTGCTGGAGGAGCCAACTCCATCCCGTCATGCTTGCCTTCTAGATTTGGCTGTGCTAGCCTTCCAGATCCAGTCGTGCTCACGTTCCTGTTCTGGTTGTGA 840 0.5167 MNIRRREEKAQTGCDRGTGRPGCCGAASSTHTIYASSLRTVACADNDDSRKSVGAMSDGGCTTCYCINPKFFNPSKVPNDEKPWDQTQATWYGTPDGAGSESGACKYGKTVENPPISKLTAAAGHYIFRQGYGCGACYEVKCTDNPACSGKSVTVVVSDECPWCSGYHFNLSGAAFASLANPSQQDTLRKLGQVNLQYRSVEEMTTDKRGAVRVKTTSQEEQPNPGPPAKEEKHERGPSRPSMSSDAAGGANSIPSCLPSRFGCASLPDPVVLTFLFWL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02517 279 MobiDBLite consensus disorder prediction 205 252 - -
Aip02g02517 279 Gene3D - 71 202 IPR036908 -
Aip02g02517 279 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 102 202 IPR007112 -
Aip02g02517 279 MobiDBLite consensus disorder prediction 226 240 - -
Aip02g02517 279 PRINTS Expansin/Lol pI family signature 124 142 IPR007118 GO:0005576
Aip02g02517 279 PRINTS Expansin/Lol pI family signature 101 119 IPR007118 GO:0005576
Aip02g02517 279 PRINTS Expansin/Lol pI family signature 83 98 IPR007118 GO:0005576
Aip02g02517 279 PANTHER EXPANSIN-B3 63 202 - -
Aip02g02517 279 Pfam Lytic transglycolase 122 197 IPR009009 -
Aip02g02517 279 SUPERFAMILY Barwin-like endoglucanases 83 202 IPR036908 -
Aip02g02517 279 PANTHER EXPANSIN-LIKE PROTEIN B1 63 202 - -
Aip02g02517 279 SMART dpbb_1 120 198 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02517 Aip-Chr2 99276237 99286382 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02517 65 202 Expansin Gene Family AT1G65680 47.143 7.29e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02517 - - adu:107475617 293.123