Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02500 atggcgtcgtcgtcatccctctgcgtcgcccacagCAATCAAGAAACTGAACTCACCATTGACGATGACTTTGATATCTCTGGATTGAAGCCCCTCAAAGTCCCTACCAAGATCTTCTTCAAACATTCTTCCATGGATCCCCACAAAAAGGGTTCTGCAGAAGCTGAGTTTTTCACTAAGTATGGAGAGGCAAGCCGATACCAAATCCACGAAGTCATCGGGAAAGGAAGTTATGGCGTCGTGGGCTCTGCCATTGATACTCATACTGGGGAAAAAGTTGCAATCAAGAAAATCAATGATGTTTTTGAACATGTATCGGATGCTACAAGAATCCTAAGAGAAATTAAGCTCCTGCGCTTGCTTCGCCATCCTGATATAGTAGAAATTAAACATATTATGCTTCCTCCTTCCCGTCGAGAGTTTAAGGATATCTACGTTGTCTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATCAAGGCAAACGATGATCTTACACCTGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATATATACATACAATATACCCCTGCAATTGA 576 0.3854 MASSSSLCVAHSNQETELTIDDDFDISGLKPLKVPTKIFFKHSSMDPHKKGSAEAEFFTKYGEASRYQIHEVIGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTIYPCN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02500 191 SMART serkin_6 67 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02500 191 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 186 - -
Aip02g02500 191 SUPERFAMILY Protein kinase-like (PK-like) 61 186 IPR011009 -
Aip02g02500 191 ProSitePatterns Protein kinases ATP-binding region signature. 73 97 IPR017441 GO:0005524
Aip02g02500 191 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 186 - -
Aip02g02500 191 ProSiteProfiles Protein kinase domain profile. 67 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02500 191 Gene3D Phosphorylase Kinase; domain 1 40 189 - -
Aip02g02500 191 Pfam Protein kinase domain 67 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02500 Aip-Chr2 99072431 99073507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02500 17 186 MAP Kinase Gene Family AT1G18150 80.588 7.57e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aip02g02500 Pkinase 5.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02500 - - rcu:8273213 296.589