Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02497 ATGTTTGCTCTCTTGTCCTGTTTGAAGCGTCCCTGGCGTGTTCAATCTCGCTGCATCCCGCGAGTGCTGGAGGGCCGCCACGTGCTCGGCATCGATGAAACTGGAAGCGGCAAGACCGCCGCTCTCGCCCTCCCGATCCTCCACCGCCTGTCGGAGCACCTGTTCGGTGTGTTCGCGTTGGTGGTGACGCCCACTAGGGAACTGGCGTTCCAGCTACCAGAGCAGTTCCGCGCCCTCGGTTCCTGCCTCCACCTCCGCATTGCAGTGGTTGTCGGCGGCATGGACATGCTTCAGCAAACCAAGGAGCTTGCTGCCAGGCCCCACGTCGTTATTGCCACGCCGGGGAAGATCAAGGCCTTGCTCGAGAATCCTGATATTCCTCTAGTTTTTGCTAGAACTAAGGAGGAATTGAAATTTATCTTTAAGTGCTTACCAGAAAATCGGCAAAATCTGTTCTTTTCTGCAACAACCACAAGTAATCTGCAAAGTTGTCTGAGCGTTACCAGGATAGACTGTATGTCTACGAGGCATATGAAGGCCTGA 543 0.5451 MFALLSCLKRPWRVQSRCIPRVLEGRHVLGIDETGSGKTAALALPILHRLSEHLFGVFALVVTPTRELAFQLPEQFRALGSCLHLRIAVVVGGMDMLQQTKELAARPHVVIATPGKIKALLENPDIPLVFARTKEELKFIFKCLPENRQNLFFSATTTSNLQSCLSVTRIDCMSTRHMKA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02497 180 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 8 167 - -
Aip02g02497 180 SMART ultradead3 7 170 IPR014001 -
Aip02g02497 180 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 19 175 IPR014001 -
Aip02g02497 180 Pfam DEAD/DEAH box helicase 13 124 IPR011545 GO:0003676|GO:0005524
Aip02g02497 180 PANTHER RNA HELICASE 8 167 - -
Aip02g02497 180 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 163 IPR027417 -
Aip02g02497 180 Gene3D - 3 169 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02497 Aip-Chr2 99054063 99055128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02497 6 162 Eukaryotic Initiation Factors Gene Family AT5G11200 29.885 6.64e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02497 K14778 - gmx:100798597 253.062