Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02494 ATGAAAACCAGCTCCGATGGATATTGTGGCCGTGATTATGCGAGTGACGAAGATGGTGATGAGGATGAAGGTGGTGAGCGCTGTGGTGGTGAGGAAGGTGACCCAAAAGGTCGCAGAGAAGATGAACATGGTAATTTCTCAGGTGGTGCCAGTCATGTAGGGGATGACGCGAAAATTCTTCCAATTGTCGCAGAGGATTTCCTGGGCAGAGAGTTTGTTGGGGAGGAGGATGCCTATCTTGCGTACAAGGAGTTTGCTAGAATAAGGGTTTTGGGGTCCGCAAGGGAGGAGAGGTTGGAGAGTCGAACTGACTGCAAGGCAAAGTTGAAGATTTACTATGATGTGCAACGCAATGTGTGGAAGGTCAGGACCATCTTCGGTGAGCACAACCACGAGCTTGCTCTGGCCATGTTTTCCCACCTCCTGCCTAGCCATCGCAAGATGAGTAATGGTGACAAAGCACAAGTTGATAGCATGAAACCGTTTGGGATACCAACCTCAAAGATAATGGCTTACATGGCTGGTCAATCTGGAGGCAACAAACAGTTATTTGGAGATGTTCTGGCTTTTGATTCGACGTATCGGTCTAATAAGTACAAGAAACCGCTTGTAGTGTTCTCCGAGTCAAATCACCACAAACAGACAACCATTTTTGGATTTGCACTCCTGGAGGATAAAGAAGTTCGTAGTTACCGGTGGCTACTGTTAAATCTTGTAGACGTAATGGGAGAGAAGACGTCGTGTGTTGTTGTCACGGATGGGGACAAAGCGATGCGCGCAGCCATTGCGGAGGTGTTCCCGGCAGCTAGGCACCGGCTGTTTGGGTGGCACTTGGAGAAAAACTGTGTTCAGAGGGTTAAGGATACCGAATTTCGGAAGGTCTTTAAGAAGGCTATCTATGCGAACTTCAAGGTAGATGACTTCGAGGAATATTGGAAGACGGCGGTGGAGTCACTTGGCCTACAAAATAATAGTTGGGTTCAAAGCACATACGAGGTCAAAGAAAGTTGGGCAACAGCATATCTCCGGGGCACGTTCTGTGCGGGATACAGGACAACCGCAAGGTTTGAGGGGATTAATGCATACATAAATGGGTTCCTAAAATCCACTGATAGCATTTTGGAGCTAGTGCACAGCTTAGATCGCATTGTAAAGGATTATCGAAACAACGAAGTCACGGCACAGTTCTATTCTACATACTATAGCCCCGTGTTAACAACCGGACTTGACTCAATAGAGCTTTTTGCATCAAAACTGTACACGCGGGCAGTTTTTAGAGGTGAAAAAACAAATCAAGGGTGTTACAACCTTGCTGTTTCGTGGGAGAGACAGCATCAGCACAACGATTGTCTACAAGTTTTCAAGGATGGGCGCCCCTGTGAGGGTATTCCATGTAGTCACATATTCTGCGTGATGAAATACGAGGATTTGGAACAAATATCGGACAGCCTTATAATGAGAAGATGGTGCAAGGATGCAAAGGATTCCAGACGGATGCCGTTGACTACGAGACCTGGACATGAGGGTCGCATGCTTAGGGAGAGCATTGTGAGTCTAATAGAGAAGCTATGTCACAGAGTTTATGAGAGGGCAGACGGTCAGCCAGGTATGTCGGCGTGGTGCGCGATGAAGGACCCGGTTGTGGCAAGAACAAAAGGTGCCCCTAAGAGGGCGAAGGAGTTCGACCAAAGTAGTCAACCCGACGTCCGAGGGAAGAGACGTTGCTGCACCAAGTGTGGCATTTCCGGGCATACGAAAAGGACATGCAGCAGGAACTGTGCACGAGGTGTTTCTGGGGTAGGTAATGGGGTCTCCCCCACGTGTGGCAACGGTTCGCATCACGGCTCTGCAGCCGCTTCAGCGTCGCTTCCGACAGAGCTCGATGATGCGTATGAGTCCACCAAACTATGTCGTTTTATAATCCCTTTTCCTCCCTCAACGTCACTTTCACATAAGCTCTCTCATCTCTCATATCTCATTGACCCAAGTTTTCTCCTTCTATCAGCATCATCCGACAAGCTCGTCGTCGGTCTCTCCCGGCTCCGATCTCGCGTGCCTTCCTTGCCGTCGTCATCACTGGCGGCAGTAGCAGCAGCTCCTGGACCTGGACGTCGTCGCCGCTCCGTGTCTTGTCACTGCCTCGTAGTCAGTCTCGCGCCGTCATTGCCCCCGTCGACGCCGAGACAGAAGCAGCAAGTCCCCGACTTCCTCCTCGCCTTCAGCAACTCCTCGGCCTCCTTCGCACAATCTGGTCCCAATCTGGTGAGTTTTCAACAAATTTTTCTCTTCATCTGTTTTGTGTTTGGTTGCTGTGTTTGA 2319 0.4959 MKTSSDGYCGRDYASDEDGDEDEGGERCGGEEGDPKGRREDEHGNFSGGASHVGDDAKILPIVAEDFLGREFVGEEDAYLAYKEFARIRVLGSAREERLESRTDCKAKLKIYYDVQRNVWKVRTIFGEHNHELALAMFSHLLPSHRKMSNGDKAQVDSMKPFGIPTSKIMAYMAGQSGGNKQLFGDVLAFDSTYRSNKYKKPLVVFSESNHHKQTTIFGFALLEDKEVRSYRWLLLNLVDVMGEKTSCVVVTDGDKAMRAAIAEVFPAARHRLFGWHLEKNCVQRVKDTEFRKVFKKAIYANFKVDDFEEYWKTAVESLGLQNNSWVQSTYEVKESWATAYLRGTFCAGYRTTARFEGINAYINGFLKSTDSILELVHSLDRIVKDYRNNEVTAQFYSTYYSPVLTTGLDSIELFASKLYTRAVFRGEKTNQGCYNLAVSWERQHQHNDCLQVFKDGRPCEGIPCSHIFCVMKYEDLEQISDSLIMRRWCKDAKDSRRMPLTTRPGHEGRMLRESIVSLIEKLCHRVYERADGQPGMSAWCAMKDPVVARTKGAPKRAKEFDQSSQPDVRGKRRCCTKCGISGHTKRTCSRNCARGVSGVGNGVSPTCGNGSHHGSAAASASLPTELDDAYESTKLCRFIIPFPPSTSLSHKLSHLSYLIDPSFLLLSASSDKLVVGLSRLRSRVPSLPSSSLAAVAAAPGPGRRRRSVSCHCLVVSLAPSLPPSTPRQKQQVPDFLLAFSNSSASFAQSGPNLVSFQQIFLFICFVFGCCV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02494 772 PANTHER OS02G0262500 PROTEIN 89 174 - -
Aip02g02494 772 PANTHER OS02G0262500 PROTEIN 176 434 - -
Aip02g02494 772 MobiDBLite consensus disorder prediction 1 52 - -
Aip02g02494 772 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 174 IPR031052 GO:0006355
Aip02g02494 772 ProSiteProfiles Zinc finger CCHC-type profile. 576 589 IPR001878 GO:0003676|GO:0008270
Aip02g02494 772 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 176 434 IPR031052 GO:0006355
Aip02g02494 772 Pfam MULE transposase domain 187 281 IPR018289 -
Aip02g02494 772 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02494 Aip-Chr2 98931001 98936303 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02494 MULE 5e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02494 - - ahf:112709549 729.169