Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02493 ATGGATGTTGATTCGGAACCACTCAATTCAGAAGAGAACGTTGAAGATTGCTTGATGACCGGTGTGGAAGAGAATGTAAATTGCACTTGTGATTGCGGTGGCAGCAGTAGCAAGTGTGTTGTTGTGACGGCCGATGATATTATAAATCAGACATTTGAAACATCGGATGCAGCTTATCACTTGTATGTGCGTTATGCAAGGTGTGTCGGGTTCGGAGTTCGCAAGGGTGATATAGCGCGTGGAAAAGATGGAACACAACGCAGAAGGCGATTTTTTTGCAACAAGGAAGGAAAGAGAGCCGATAAATACATCTCTAATTTGAACAGGAAGAGGGAGCATAAAGCGCTGACTCGTACGGGTTGTGAAGCCATGCTTGCGGTGTACTTTGACACCAAAACTTCAGCTTGGAGAGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTGTCCCCCAATGCTTGGTACACCTAATTCCAAACCACCGTGGGATGAACGAGGCTCAAAAAACTCAGGCAAACACCATGCACAATAATGGTCTTTCAAGCTCTAAGATAATGGGACTAATGGTAGGCCAAGCCGGGGGTTATGCTAATGTCGGGTTCACAAAGAAGGATCTGGATAACCACATTGAAAGAACTCGTCGTGCAAAGCTCATTGGTGGGGATTCTAATGCAACAATTAGCTATCTACTTGGAAAAGCCGATGTTGACCCCATGGCCATGGCAAGGTACAGTGCTACTGATGAAAGTCGGCTGGCGAATCTATTTTGGGCAGATGGCATTTGTAGGGCGGATTATCAGTGCTTTGGAGATGTGCTTGCATTTGATACAACCTATCGGAAAAATAAGTACAGAAGACCGTTGGTTATCTTCTCGGGTTGTAACCATCACCGTCAAACATGCATATTTGGCTTTGCCTTGATAGAGAACGAACAAACGGCAACATATACGTGGTTGTTGCAAAACTTTCTAGATGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGATGGTGATGAGGCAATGAAGGCAGCAATTCAAGAAATCTTCCCAAATGCAACTCACCGATTATGTGGTTGGCACATTTAG 1092 0.4441 MDVDSEPLNSEENVEDCLMTGVEENVNCTCDCGGSSSKCVVVTADDIINQTFETSDAAYHLYVRYARCVGFGVRKGDIARGKDGTQRRRRFFCNKEGKRADKYISNLNRKREHKALTRTGCEAMLAVYFDTKTSAWRVKKLVEKHNHDLVPQCLVHLIPNHRGMNEAQKTQANTMHNNGLSSSKIMGLMVGQAGGYANVGFTKKDLDNHIERTRRAKLIGGDSNATISYLLGKADVDPMAMARYSATDESRLANLFWADGICRADYQCFGDVLAFDTTYRKNKYRRPLVIFSGCNHHRQTCIFGFALIENEQTATYTWLLQNFLDVMLNKSPSVVVTDGDEAMKAAIQEIFPNATHRLCGWHI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02493 363 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Aip02g02493 363 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 363 IPR031052 GO:0006355
Aip02g02493 363 Pfam MULE transposase domain 272 363 IPR018289 -
Aip02g02493 363 PANTHER OS02G0262500 PROTEIN 46 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02493 Aip-Chr2 98927914 98929005 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02493 MULE 9.2e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02493 - - ahf:112730498 753.436