Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02471 ATGGGAAATTACAAGTTTAAGCTTTCAGATATGATCCCAAATGCTTGGTTTTACAAACTTAGAGATAATATGTCTAAGGGAAGAAAACAAACCACCACCAAAAAGAAAAACCACCACCAACCACCACCACCATCAACCACCACCGCCGCCGCACATTCACCAAAACAACAAAAGCAACAACCCCATTTCCCCCACCACCATTGCACCCCAAGAAAATCTTACTACTTCACAAGGGAGCTCAATTACCAAAATAACCCCAAAGATTCACCACCACAAAGAAAATCTTCATCATCAAAACAACAAAGAGAGAGAAGAATTAGGAAAAGAAGAACAACAACATCATCATCATCGTCATCACCAAAGTTAGTTACTTCCTCCTCCTCTGTCTCTTCTGCTGCTAATTGTAGCTGCAGAGCAACAACAACCACACTCATTGAATCTGTTTGGACCAATAACAAATCAGATTCTCCACCTTATGATGACCAAGAATATTCATCAACACCTCCATTTCATGAAGATTCACCAAAAGAAGATTCCCCTAACAACAATGAACCAAATTTCAGAACAGACCATGTTCTTCTTCCAACCACCACCACCACAACAACAACAGAGTCTTCATCATTTGATGAAATGATTTCTTTTTCCAACACCACCAACAGTGACATAGTCATAGATGTGGACAAGAATTCACTTGTTTCAACAAGAAAAAAACACTATCATCATCATAAATTTGATGACTCATTTTCTGAGCTTGAGTCGTTGCCTCCAATCATAACCAAACCAAGAACAACCACCATGGCTGAAGAACAAAAAACCATGAAGGTTAAGAAGATTGTGAAGGAACAAGAACAAGAACAGAGGAAGAAGAACAACCCTACTACTAACTATGTTAGAGGATTCTCTCTGAATAATTCACCAGGTATGAAGGTTAAGATCAATTCACCAAAGCTAATGAACAAGCTCAATAACAATAATAACAACAATAGTAATGGCCGGAGAAGCGTGTCGTCGAGCTCCGGCTGCCGGAGAAGCATCTCCGGCAGCTTTGCTGTAGTGAAGTCATCCTTGAATCCAATGAAGGATTTCAGAGAATCAATGGTGGAGATGATTGTGGAGAACAACATAAGGAACTCAAAGGACTTGGAGGATCTTCTTGCTTGCTACCTCTCTCTCAACTCAGATGAGTATCATGAACTCATCATCAAGGTCTTCAAGCAAATTTGGTTTGATTTCACACAAACAAGGCAAATGAAAAAATTGGGACATTTTGGGTTTCTCTCATGTCATGTTTGTGAAAGAAAGAGGCACCAAATACTTGCATCTGAATTAGAGTACACTCTCTTATAG 1347 0.395 MGNYKFKLSDMIPNAWFYKLRDNMSKGRKQTTTKKKNHHQPPPPSTTTAAAHSPKQQKQQPHFPHHHCTPRKSYYFTRELNYQNNPKDSPPQRKSSSSKQQRERRIRKRRTTTSSSSSSPKLVTSSSSVSSAANCSCRATTTTLIESVWTNNKSDSPPYDDQEYSSTPPFHEDSPKEDSPNNNEPNFRTDHVLLPTTTTTTTTESSSFDEMISFSNTTNSDIVIDVDKNSLVSTRKKHYHHHKFDDSFSELESLPPIITKPRTTTMAEEQKTMKVKKIVKEQEQEQRKKNNPTTNYVRGFSLNNSPGMKVKINSPKLMNKLNNNNNNNSNGRRSVSSSSGCRRSISGSFAVVKSSLNPMKDFRESMVEMIVENNIRNSKDLEDLLACYLSLNSDEYHELIIKVFKQIWFDFTQTRQMKKLGHFGFLSCHVCERKRHQILASELEYTLL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02471 448 MobiDBLite consensus disorder prediction 281 302 - -
Aip02g02471 448 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 415 IPR038933 GO:0045892
Aip02g02471 448 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 349 410 IPR006458 -
Aip02g02471 448 MobiDBLite consensus disorder prediction 26 135 - -
Aip02g02471 448 MobiDBLite consensus disorder prediction 317 342 - -
Aip02g02471 448 Pfam Transcriptional repressor, ovate 355 410 IPR006458 -
Aip02g02471 448 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 415 - -
Aip02g02471 448 Pfam DNA-binding domain 1 38 IPR025830 GO:0003677
Aip02g02471 448 ProSiteProfiles OVATE domain profile. 351 410 IPR006458 -
Aip02g02471 448 MobiDBLite consensus disorder prediction 150 191 - -
Aip02g02471 448 MobiDBLite consensus disorder prediction 37 58 - -
Aip02g02471 448 MobiDBLite consensus disorder prediction 76 96 - -
Aip02g02471 448 MobiDBLite consensus disorder prediction 112 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02471 Aip-Chr2 98535896 98539105 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aip02g02471 Ovate 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02471 - - ahf:112728150 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02471 02 98535896 98539105 Aip02g02471 02 98535896 98539105 ECH