Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02468 ATGCCGGGGACACAAAATGACACGTTCACGGAGGCATCTGCGTCAAAAGGCGTCGTTTTGTTCGGCAAATATGAGATTCTGGAATTGGCTGGAGTAGGCGCGTCAGCAAAGGTGTACCACGCTCGGCGTGTCGATACTGGCGAGAGCGTGGCGGTTAAGGCCGTTAGCAAGCGCCAGCTCAGCACTATAGACGGTTACGCGGCGCAAATCGAGCGCGAAATTTCTATCATGCGCCGGATGCACCACCCGCACACCGTGAGGCTCTTTGAGGTACTTGCCACGAAGGCGAAGATTTACTACGTCATGGAGTACGCCGCCGGTGGCGAGCTTCTGCGCCGTGTCTCCTCCGCCGGAAGGATGACGGAGAATCTCGCCAGAAGATACTTCCAGCAGCTGATCTCCGCCGTCGCGTACTGCCACTCTCACGGCGTCTTCCACCGCGACCTCAAGCTTGAGAACCTCCTCGTCGACGAGAATATGGACCTGAAGGTGACGGATTTCGGGCTGAGTGCGGGTCGGAGTCAGTTCGGGCCAGACGGTTTGTTACACACGATTTGCGGTACTCCTGCTTACGTGGCACCTGAGATTCTCGCGAAAAAAGGCTACCGCGGAGGAAGTGTTGATATTTGGTCATGTGGTGTTATTTTATTCACTATTGTTGCGGGGTTGTTAGATAGGAATCCAGAGACGAGAATTACTATTGACGAGATTTTGAAGGATCCATGGTTTTGTCAGGGCGGATACAAGTACCCGACCCGAGTGGTGCCCGAGTTAGATGAGGATCATGTGATGCTGAAGGATTTGAACGCATTTGATTTGATTTCTTTCTCATCCGGGTTTGACATTTCGGGTTTGCTGACCCACTCGGAGTATTTGAATTGCGTGGAGCGGTTTGTTTCTAAAGAGGAACCGGAAAGTATATTGAAGAGGGTGAAAATAATGGGGGCTAAGATGGAAAGGGTGAGAGTGGAAAAAGACGAAAATGCTTGTGAAGGTGTGAGGTTGGAAGGGTTAGATGGTAATTATGTAATTGCTGTTAGGATTTATAGATTAATGAATGAATTGGTGGTTATTGAGGTCAAAAGAAAAGAGAAAAAAGTGGGAGGTGGAAATTTTTGGAGGACTAGGTTGAAACCTTTACTTCTTGAATTGGCTCTCCGTTGA 1164 0.4966 MPGTQNDTFTEASASKGVVLFGKYEILELAGVGASAKVYHARRVDTGESVAVKAVSKRQLSTIDGYAAQIEREISIMRRMHHPHTVRLFEVLATKAKIYYVMEYAAGGELLRRVSSAGRMTENLARRYFQQLISAVAYCHSHGVFHRDLKLENLLVDENMDLKVTDFGLSAGRSQFGPDGLLHTICGTPAYVAPEILAKKGYRGGSVDIWSCGVILFTIVAGLLDRNPETRITIDEILKDPWFCQGGYKYPTRVVPELDEDHVMLKDLNAFDLISFSSGFDISGLLTHSEYLNCVERFVSKEEPESILKRVKIMGAKMERVRVEKDENACEGVRLEGLDGNYVIAVRIYRLMNELVVIEVKRKEKKVGGGNFWRTRLKPLLLELALR 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02468 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Aip02g02468 387 SMART serkin_6 24 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02468 387 PANTHER - 220 384 - -
Aip02g02468 387 CDD CIPK_C 269 364 - -
Aip02g02468 387 Pfam NAF domain 267 325 IPR004041 GO:0007165
Aip02g02468 387 Pfam Protein kinase domain 24 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02468 387 ProSiteProfiles Protein kinase domain profile. 24 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip02g02468 387 Gene3D Kinase associated domain 1, KA1 264 385 - -
Aip02g02468 387 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Aip02g02468 387 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 10 224 - -
Aip02g02468 387 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 220 384 - -
Aip02g02468 387 ProSiteProfiles NAF domain profile. 263 287 IPR018451 GO:0007165
Aip02g02468 387 PANTHER - 10 224 - -
Aip02g02468 387 SUPERFAMILY Protein kinase-like (PK-like) 20 253 IPR011009 -
Aip02g02468 387 Gene3D Transferase(Phosphotransferase) domain 1 108 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02468 Aip-Chr2 98487367 98488641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02468 12 363 CBL-interacting serine-threonine protein kinases AT2G30360 50.127 8.11e-128 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aip02g02468 Pkinase 2.2e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02468 - K12761 qsu:112004057 379.407