Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02443 ATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCGATTCTACAAGACTTATGCAATAATGCACGATTTCGCTGTGAGGTTAGATGAAGTCAGACGCGATAGCGATGGTTGCATAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCTGGGTGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCATTCTACGAAGAGCACTCTCATGGATTAGTTGATCCACTCAACGTTAGTATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCGAAGAATTTGGACGACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGCTGGGAATGATTCTTATTTCTTTAGCAAGCACACATTAAGTAATGAGAATCGATTGGAAAATTTGTTTTGGGCTGATGGGACTAGCCCTATTGATTATGAGTGCTTTGGGGATGTCTTGACATTTGATTCGACTTACAATAGGAACGTCTACAATAAACCACTTGTGATATTTTCTGGTAGCAATCATCATGGGCAGACTGTCATATTTGGATGTGGTCTTTTTGTTAATGAGGATATTGGTTCATACAAGTGGCTCTTGGAAACTTTTTTGGAAGCAATGGGGAATAAACACCCTATGGCAGTTGTCACCGACGGAGATCTTTCAATGAGAGAAGCCATTAAATAG 783 0.4151 MQLQFTDEEAVYRFYKTYAIMHDFAVRLDEVRRDSDGCIIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCWVRIRARLDRKIHKWKVVSFYEEHSHGLVDPLNVSMMPEYRTFSVSDKAQAKNLDDIGIRTCHILGYLAAQKAGNDSYFFSKHTLSNENRLENLFWADGTSPIDYECFGDVLTFDSTYNRNVYNKPLVIFSGSNHHGQTVIFGCGLFVNEDIGSYKWLLETFLEAMGNKHPMAVVTDGDLSMREAIK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02443 260 PANTHER OS02G0262500 PROTEIN 145 260 - -
Aip02g02443 260 PANTHER OS02G0262500 PROTEIN 3 139 - -
Aip02g02443 260 Pfam MULE transposase domain 184 260 IPR018289 -
Aip02g02443 260 Pfam FAR1 DNA-binding domain 13 102 IPR004330 -
Aip02g02443 260 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 145 260 IPR031052 GO:0006355
Aip02g02443 260 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 139 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02443 Aip-Chr2 97993025 97993927 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02443 FAR1 1.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02443 - - aip:107627742 494.197