Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02441 ATGCCGTGGCGTTCATGTGGACCAAAAATTCCACAGTGGATGCCCATTAGTTTTAGACCACCGGAGGACAGGATTCTAACGACGGATGAGCTTGCTTGTGCCGCTTATATTTTTGGCCCGGATTTAAAGTTCCAAGTTAATCGACCACCCAATCAACTAAGGGAACAACATGCAGATAACTACATGTGTAAGATTGAGTACTTGTCAAGGATTTCTAAGTTTCGTATCGTGGAACCGTCTGACCTGCCACAACAGAGGAAAGGCTCTAACAACTGCGGTATCTGGGTTGCTCAATGGATGAAAGAGTGCGGGTGGACTGATAATTTTGGCATCACGTTGAAACCTTCCTTCGCCGCTGACATCTCTGTTCGTTCTGTTCGTGCTTCAGGTAGAGTTCCAAGAGGAGACGATCTAGATTTTTTAGACGACGATTCAGAGACTGATGAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTGCGTAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCCTGGACCACCAACCCCTAACTCGAAGTTGTTGCCGGGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCATTCTACGAAGAGCACTTTCATGGATTAGTTGATCCACTTGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCGAAGAATTTGCACGACATAGGAATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGTCATCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAAGGAAAAAGAACGTCTACAATAAACCACTTGTGATATTTTCTGGTAGCAATCATCATGGGCAGACCGTCATATTTGGATGTGGTCTTATTGTTAATGAGGATATTGGTTCATACAAGTGGCTCTTGGAAACTCTTTTGGAAGCAATGGGGAATAAACACCCTATGGCAGTTGTCACCGACGGAGATCTTTCAATGAGAGAAGCCATTAAATAG 1206 0.4362 MPWRSCGPKIPQWMPISFRPPEDRILTTDELACAAYIFGPDLKFQVNRPPNQLREQHADNYMCKIEYLSRISKFRIVEPSDLPQQRKGSNNCGIWVAQWMKECGWTDNFGITLKPSFAADISVRSVRASGRVPRGDDLDFLDDDSETDEDRPQDKRIAELSREDIMQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRRDSDGCVIMRQIVCNRAGSRKEEVEKDERILDHQPLTRSCCRARIRARLDRKIHKWKVVSFYEEHFHGLVDPLDVSMMPEYRTFSVSDKAQAKNLHDIGIRTCHILGYLAAQKGGYANLSSTKKICTTSLLNIGRKKNVYNKPLVIFSGSNHHGQTVIFGCGLIVNEDIGSYKWLLETLLEAMGNKHPMAVVTDGDLSMREAIK 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02441 401 Pfam MULE transposase domain 333 401 IPR018289 -
Aip02g02441 401 Coils Coil 397 401 - -
Aip02g02441 401 PANTHER OS02G0262500 PROTEIN 163 321 - -
Aip02g02441 401 PANTHER OS02G0262500 PROTEIN 333 401 - -
Aip02g02441 401 Pfam FAR1 DNA-binding domain 178 267 IPR004330 -
Aip02g02441 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 163 321 IPR031052 GO:0006355
Aip02g02441 401 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 333 401 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02441 Aip-Chr2 97966103 97973586 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02441 FAR1 3.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02441 - - aip:107627742 424.091