Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02439 ATGCAACTTCAGTTTATAGATGAGGAAGTTGTTTATCGATTCCACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTGCGTAATTATGCGCCAAATTGTTTGCAATCGGGCGCTCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTATTGCCGGGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCATTCTACGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCGAAGAATTTGCACGACATAGGCATCAAGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGAGTTTCAGGTCATGTGGGGAGACATGGTGACGAGGACAACATCCCAGTGTGAAGGGATTAACTCTCTGATAAAAGCATATGTGAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATGGAGACCGTTGTTAGCCATTACAGAAACAATGAAAGAGTTGCAGAGTTCAATAGTAAATATACCGATCCAGTACTTGTGACTTCTTTGCTGACACTTGAAGATTTTGATGCAAAGACTTTCACTCGTAACATGTTCCAGGAGGTTAGGAAGGAAATTGAGGGTGCTTGTGCTATGAATACAGAGTTGGTAATTCAGGATGGGGGAAAACTATACTTCAAGTGTAATAGTTTTGAAGTGCCAAAGATTGATCATGTGGTTGAGTTTGACAGAGTTGGGGGGATGCTTCGTTGTGAGTGTCTGTGGTTCGAAAATAGAGGGATTCCCTACATGCACATATTCGCATGCCTAAAGCACCAACACGTTGAAGTTATTCCAAAACGCTTAGTGTGCAAGCGTTGGACGAAGAATGCCAAGAGCAATTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTTGTTTGGGTGTGTTGGGTGCTGAGTGTTCTAGGTTGATGGATGTTGCAAGTAAGAACTCAAGTGATTTTGTCGAAGCAATGAATGATGTTGTCAACACAATTACAAAACTCCAAAAGCAAGGTGAAAATCCACGCAACGGTAATTTAGACGGTGACTACGTTGTTGACCCATTGGTGGTGAAGAGTAAGGGAGCTCCCAAGAAAAACTCAAAATTTAAGCAACGTAGAAGGTGTTCAAACTGCGGTGTGACAGGGCACTACAACAAAAGTTCTCTTAATGTTCTTGGTAGAATCCCAAAGGAGCCGGTAGACGATGATACAGAAAAGAATATCAGCAGCCATCTTGACATCCTCATTAAGCGCAAAAGACATGACAATATGAAAAATCAGCAGAAGATGGAAAAAGATAGGAACATTGGTGGTGGAACAACACCAACCTCAACAGCTAAGTCGGCTTTTACTGATCAAGTGAAAACATCAAGTCCTGGTCCCGATATTCCGGTTTGTGCATCTACAAGCAACGAAGAGTTTGGGATGAGTTTCAGAACAACTGAATCTCCTGTTGTGGCCCCTGAAACTGGAATGGCAGATTGA 1626 0.4256 MQLQFIDEEVVYRFHKTYAMMHGFAVRLDEVRRDSDGCVIMRQIVCNRALSRKEEVEKDERIRDHRPLTRSYCRARIRARLDRKIHKWKVVSFYEEHSHGLVDPLDVSMMPEYRTFSVSDKAQAKNLHDIGIKTCHILGYLAAQKEFQVMWGDMVTRTTSQCEGINSLIKAYVRKKDTLLEFINNMETVVSHYRNNERVAEFNSKYTDPVLVTSLLTLEDFDAKTFTRNMFQEVRKEIEGACAMNTELVIQDGGKLYFKCNSFEVPKIDHVVEFDRVGGMLRCECLWFENRGIPYMHIFACLKHQHVEVIPKRLVCKRWTKNAKSNFMKSNVDDPSDSDKVLKCCLGVLGAECSRLMDVASKNSSDFVEAMNDVVNTITKLQKQGENPRNGNLDGDYVVDPLVVKSKGAPKKNSKFKQRRRCSNCGVTGHYNKSSLNVLGRIPKEPVDDDTEKNISSHLDILIKRKRHDNMKNQQKMEKDRNIGGGTTPTSTAKSAFTDQVKTSSPGPDIPVCASTSNEEFGMSFRTTESPVVAPETGMAD 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02439 541 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 5 110 - -
Aip02g02439 541 MobiDBLite consensus disorder prediction 472 541 - -
Aip02g02439 541 Pfam FAR1 DNA-binding domain 13 102 IPR004330 -
Aip02g02439 541 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 110 IPR031052 GO:0006355
Aip02g02439 541 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 156 336 - -
Aip02g02439 541 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 156 336 IPR031052 GO:0006355
Aip02g02439 541 MobiDBLite consensus disorder prediction 480 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02439 Aip-Chr2 97896154 97907465 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02439 FAR1 6.2e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02439 - - aip:107641230 672.93