Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02438 ATGCAACTTCAGTTTACAGATGAGGAAGCTGTTTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCAATAGCGATGGTTGCGTAATTATGCGCCAAATTGTTTGCAATCGGGCAGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCGGGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCATTCTACGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCGAAAAATTTGCACGACATAGGCATCAGGACCTGTGACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGTCATTCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAAGGAAAAAGTGAAGGGTGGTGATGCAAATGTTGCAATAAGCTACCTGAGAGGTAAAGCTGGGAATGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAGAATCGATTGGAAAATTTGTTTTGGGCTGATGGGACTAGCCCTATTGATTATGAGTGCTTTGGGGATGTCTTGACATTTGATTCAACTTACAATAGGAACGTCTACAATAAACCACTTGTGATATTTTCTGGTAGCAATCATCATGGGCAGACCGTCATATTTGGATGTGGTCTTATTGTTAATAAGGATATTGGTTCATACAAGTGGCTCTTGGAAACTTTTTTGGAAGCAATGGGGAATAAACACCCTATGGCAGTTGTCACCGACGGAGAGTTTCAGGTCATGTGGGGAGACATGGTGACGAGGTATAACTTATCAAGCAACTCTTGGGTCGACCAAACCTATGAGTTGCGGAATTTATGGGCTCTTGCCTATTTGAGGGACCAATTTTTTGGGCGAATTAGGACAACATCCCAGTGTGAAGGGATTAACTCTCTGATAAAAGCATATGTGAGAAAGAAAGATACCCTTCTTGAATTCATTAATAACATGGAGACCGTTGTTAGCCATTACAGGAACAATGAAAGAGTTGCAGAGTTCAATAGTAAATATACCGATCCAGTACTTGTGACTTCTTTGTCGACACTTGAAGATTTTGCTGCAAAGACTTTCACTCGTAACATGTTCCGGGAGGTCAGGAAGGAAATTGAGGGTGCTTGTGCTATGAATACAGAGTTGGTAATTCAGGATGGTGGAAAACTATACTTCAAGTGTAACAGTTTTGGAGTGCTAGAGATTGATCATGTGGTTGAGTTTGACATAGTTGGGGGGATGCTTCGTTGTGAGTGTCTGTGGTTCGAAAATAGAGGAATTCCCTACATGCACATATTCGCATGCCTAAAGCACCAACACGTTGAAGTTATTCTAGAACGCTTAGTGTGCAAGCATTGGACGAAGAATGTCAAGAGCGATTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTCGTTTGGGTGTGTTGGGTGCTGAGTGTTCTAGGTTGATGGATGTTGAAAGTAAGAACTCAAGTGATTTTGTCGAAGTAATGAATGATGTTGTCAACACAATTACAAGACTCCAAAAGCAAGGTGAAAATCCACGCAACGGTAATTTAGATGATGACTACGTTGTTGACCCATTGGTGGTAAAGAGTAAGGGAGCTCCTAAGAAAAACTCAAAATTTAAGCAACGTAGAAGGTGTTCAAACTGTGGTGTGACAGCGCACTACAACAAATGTTGTCCTAATGTTCTTGGTAGAATCCCAAAGGAGCCAGTAGACGATGATACAGAAAAAATATCAGCAGCCATCTTGACATCCTCACTAAGACATGACAGTATGAAAAATCAGCAGAAGATGGAAAAAGATAGGAACATTGGTGGTGGAAAAACACCAACCTCAGCAGCTAAATCGACTTTTACAGATCAAGTGAAAACATCAAGTCCTGGTCCCGATATCCCAGTTTGTGCATCTACAAGTAACGAAGAGTCCGGGATGAGTTCCAGAACAACTGAATCTCCTGTAGGATGA 2130 0.4155 MQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRRNSDGCVIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCRARIRARLDRKIHKWKVVSFYEEHSHGLVDPLDVSMMPEYRTFSVSDKAQAKNLHDIGIRTCDILGYLAAQKGGYANLSFNQKDMYNLITQHRKEKVKGGDANVAISYLRGKAGNDSYFFGKYTLSNENRLENLFWADGTSPIDYECFGDVLTFDSTYNRNVYNKPLVIFSGSNHHGQTVIFGCGLIVNKDIGSYKWLLETFLEAMGNKHPMAVVTDGEFQVMWGDMVTRYNLSSNSWVDQTYELRNLWALAYLRDQFFGRIRTTSQCEGINSLIKAYVRKKDTLLEFINNMETVVSHYRNNERVAEFNSKYTDPVLVTSLSTLEDFAAKTFTRNMFREVRKEIEGACAMNTELVIQDGGKLYFKCNSFGVLEIDHVVEFDIVGGMLRCECLWFENRGIPYMHIFACLKHQHVEVILERLVCKHWTKNVKSDFMKSNVDDPSDSDKVLKCRLGVLGAECSRLMDVESKNSSDFVEVMNDVVNTITRLQKQGENPRNGNLDDDYVVDPLVVKSKGAPKKNSKFKQRRRCSNCGVTAHYNKCCPNVLGRIPKEPVDDDTEKISAAILTSSLRHDSMKNQQKMEKDRNIGGGKTPTSAAKSTFTDQVKTSSPGPDIPVCASTSNEESGMSSRTTESPVG 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02438 709 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 292 IPR031052 GO:0006355
Aip02g02438 709 Pfam MULE transposase domain 224 292 IPR018289 -
Aip02g02438 709 MobiDBLite consensus disorder prediction 664 709 - -
Aip02g02438 709 PANTHER OS02G0262500 PROTEIN 3 292 - -
Aip02g02438 709 PANTHER OS02G0262500 PROTEIN 292 603 - -
Aip02g02438 709 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 292 603 IPR031052 GO:0006355
Aip02g02438 709 Pfam FAR1 DNA-binding domain 13 102 IPR004330 -
Aip02g02438 709 MobiDBLite consensus disorder prediction 643 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02438 Aip-Chr2 97860460 97862853 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02438 FAR1 3.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02438 - - aip:107641230 1208.74