Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02437 ATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCCCCCCCCCCAAATTTTTAATGAGGAAGGACGACGTCGTTAGGGATAACGAAGGTAGAATCATTTGCAGGCAACTTGTTTGTAATAAGGAGGGCTGGAGGAATATAAGGTATCTTGATCTAGATGATAGATCAAGGGAGGCAAGGTCACTCATGCGAACCAAGTGTGCAGCTCGGCCTAGGGTAAAGCTTGACTATGGCTGCGGAAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGATGCCCCCCCCCCAATTTGCGCATCTGGTTCCGGCCAATCGTCGTCTCACTGTTTCTGATAAAGTCCAAGTGAAAAATATTCATAATTTTGGTGTCAAGACGTGCCATATTATGGGATATATTGCGTTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGCAAAGATTTGTACAACCACATTGATCGTTATCGTAGATCAAAAGTAAAAAATGGGGATGCCAATGCGGCAATAAACTATTTGGTTGGCAAGTCAAACAACGATCTGCTGTTCTTTGGGAAGTATACGTTCACTAGTGATGAAATGCTCGAGCATATTTTTTGGGCAGATAGGCAATCAATTGTCGACTATTACTGCTTTGGAGATATTATTGCCTTTGATTCAACGTACAAGAAGAATAAATACAACAAACCTTTGGTTATTTTTTCTGGATGCAATCATCATGGGCAGACTGTCATCTTCGGCTCTGGCCTACTATCCGACGAAACCACAGATACGTATAAGTGGTTGTTGGAAACGTTTGTTGAAGCGATGGGTGGGAAAAGTCCTAAAGCAGTAATAACTGATGGAGACCTTGCCATGCGAGATGCAATCAAGAATGCTCTTCCTGATGCGACCCATCGGTTATGCGGATGGCATCTTCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTACGGGATTTTAAGGGTCTTATATACGACAACAATGACCGCAGAGATTTTGATCATAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGGAGTACCTGGATGGAAAAGACATACGAAATTCGTGCGATGTGGTCCCATTGTTTCCTACGGGATAAGTTTTTTGGGTACATAAGGATGACGTCACAGTGTGAAGGTATAAACTCTCTCATCATATTTTATGTTAATCGCAAGAATATCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAAGAGTATAGAAACAATGAATTAATAGCTAACTTTAAGTCTCAATGCTCTGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATCTGCATCATGTTATTTCACTCGCAACATTTTTAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATCAAGGTACTAAGCACAACCTTGGACAAGGTTGAGTTCtgtaacaccctagctaccaaagctcacgcttccggctgcgcaactctgatagctcggacattacgactgtaa 1536 0.3997 MEGIMFCGISQPRSDAPPPKFLMRKDDVVRDNEGRIICRQLVCNKEGWRNIRYLDLDDRSREARSLMRTKCAARPRVKLDYGCGRWKVSCFVESHNHDLMPPPQFAHLVPANRRLTVSDKVQVKNIHNFGVKTCHIMGYIAFQKGGYRHAGFTRKDLYNHIDRYRRSKVKNGDANAAINYLVGKSNNDLLFFGKYTFTSDEMLEHIFWADRQSIVDYYCFGDIIAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTDTYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNALPDATHRLCGWHLQRNACENIKNPNFLRDFKGLIYDNNDRRDFDHRWAAILDKHNLVGSTWMEKTYEIRAMWSHCFLRDKFFGYIRMTSQCEGINSLIIFYVNRKNILIDFMHNLDRALKEYRNNELIANFKSQCSEPVMITSLEVYERSASCYFTRNIFKEIRNEIQRAGALNIKVLSTTLDKVEFCNTLATKAHASGCATLIARTLRL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02437 511 Pfam MULE transposase domain 223 317 IPR018289 -
Aip02g02437 511 Pfam FAR1 DNA-binding domain 22 101 IPR004330 -
Aip02g02437 511 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 482 IPR031052 GO:0006355
Aip02g02437 511 PANTHER OS02G0262500 PROTEIN 18 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02437 Aip-Chr2 97847951 97849486 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02437 MULE 1.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02437 - - adu:107460934 904.049