Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02417 ATGGTGGTCTCCCATGTCATGGAATGGAGAGCAGGTCTAAGAGTCCTTGTTGTTGATGATGACCCAACATGGCTTAGGATCCTTGAAAAGATGCTCAAAAAGTGTTCCTATGAAGGAAGGGGGAGAATGAACATGATGGTCATTCAGCCTATGGAAAAAGTAGTTAAAGGAAATCCAAATGCAAGGAGTTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGGAAACATGTTGAGCGAGCCGCGACTGATATAAAATCAGTGATCACAACTTATGAAGGGAAACACAACCATGATGTGCCTGCAGCACGCGGCAGCGCAGGTTACAACATGAACAGAAACTCTCTAAATAGAAACAATAGCAGTGCACCGGCGGCACCAATAAGGCCTGCGGCCGTGAATGGTTATTCTAGCGCGCCGAATTTCACGAATTCACTTTACAATCCTAGGCTTCCGGCCACCGGAACTCAAGAATCATCTTCCCTAGACATGCTGCAAGGCTCTGGACTCTTCGGCTACACGTCTCTTGGAAGATCAATGGGTTCATATGGAAACAATTCGCAACTTTCGGATGGTGTATACATCAAGGCCAAGGATGAAAGGAAGGATGACTCATTCCTTGAGTCATTTCTTTCAAAGAACTAA 645 0.4543 MVVSHVMEWRAGLRVLVVDDDPTWLRILEKMLKKCSYEGRGRMNMMVIQPMEKVVKGNPNARSYYKCTAPGCSVRKHVERAATDIKSVITTYEGKHNHDVPAARGSAGYNMNRNSLNRNNSSAPAAPIRPAAVNGYSSAPNFTNSLYNPRLPATGTQESSSLDMLQGSGLFGYTSLGRSMGSYGNNSQLSDGVYIKAKDERKDDSFLESFLSKN 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02417 214 ProSiteProfiles WRKY domain profile. 52 101 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g02417 214 SUPERFAMILY WRKY DNA-binding domain 52 101 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip02g02417 214 PANTHER OS04G0471700 PROTEIN 52 210 - -
Aip02g02417 214 SMART WRKY_cls 52 100 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g02417 214 Pfam WRKY DNA -binding domain 52 99 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip02g02417 214 Gene3D WRKY domain 51 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip02g02417 214 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 52 210 IPR044810 GO:0003700
Aip02g02417 214 MobiDBLite consensus disorder prediction 108 124 - -
Aip02g02417 214 SUPERFAMILY CheY-like 12 38 IPR011006 -
Aip02g02417 214 MobiDBLite consensus disorder prediction 96 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02417 Aip-Chr2 97415562 97419289 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02417 52 211 WRKY Transcription Factor Family AT2G38470 45.783 1.75e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip02g02417 WRKY 7e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02417 K13424 - adu:107472292 296.589