Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02412 ATGTTTCTTGATTTATTGATTATTCTGGAAAATAAAAACTCAAAACTCAAGGCAATTCCCAACTTGCTTAATGATCTCCAGATTATATACAAGCTGGAATTGAAAACAGAAGTCAAAGATGATATGCTAGATTCTTCAAAGGAAGAATCACAGGAAAATAGTGATGGTCACCAATCATCACAGGAAGTCTTGCCAGTATTTAATCAGGATCTAAATTGCCGTCCTTTGGATGAAAACACAACTGAGTTGATCGACAATAAGACAAATGTTGAAAGCTTACCAGGTTTTGGAGCAAAGAAAAGAAGGGCTCAAAGCGACCACATAGCGAAAATTGCTTTACCAGATTTGGTCGAGTATTTTGATGTGCCAATTGTAGAAGCTTTAAGAAATCTGAATATTGGGCTTACAGTTCTCAAGAAAAAGTGCAGATGGTGA 435 0.3609 MFLDLLIILENKNSKLKAIPNLLNDLQIIYKLELKTEVKDDMLDSSKEESQENSDGHQSSQEVLPVFNQDLNCRPLDENTTELIDNKTNVESLPGFGAKKRRAQSDHIAKIALPDLVEYFDVPIVEALRNLNIGLTVLKKKCRW 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02412 144 PANTHER PROTEIN RKD5 11 143 - -
Aip02g02412 144 PANTHER PROTEIN RKD4 11 143 IPR044607 GO:0003700
Aip02g02412 144 Pfam RWP-RK domain 111 143 IPR003035 -
Aip02g02412 144 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02412 Aip-Chr2 97382408 97383185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02412 2 143 AtRKD Transcription Factor Family AT4G35590 38.462 1.22e-19 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aip02g02412 RWP-RK 6.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02412 - - aip:110269293 265.003