Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02396 ATGAATGCCGGCATGTGGCTTAGTAAGCAAAGACCCAAAAGTTTTTTTGACTTTGCTGACCATAATAACTTAGCCCCCCGTGTTGTTTCGGCAGAGGATTCTAGTTGTCGATCATGTTATGGTTTGGGCGCATTCGGTACAGTAGCAGATTCAGTCACTACTGCGTCATTCCAGGTTGCAATCCGTAAAGTAGTATATGCAGGCACTCAGCCTCATTCTAGGTCCGCGACATTCACCGCCGTGCGGGTGGCTATCGACGTTGAAGCCGCCTTCGATCTGAGCCGTTTTGCTAATCAGATATCTTGTCCTCGGTCTTTGGTATTAATAGTTAGCCTTTTTGAGAATGAGAATTTCTTTAGACAGTGCTGCCGATTTGAGATGGAAAGCTATGGAGAAGGAAGTTCGGATTTCTCCGTCCAATGGACTGATGGATGGAGCATGGACTCAACGGATGATGACGAAGGAAGTGCTGCACGGTCACCAGAGATAGAGGAAGGTCAATCGGCAGCGAGGGATAGAGAAGATGGTTCAGTGGCTGGTGATGAGGGTTCCATGCTGGTACCAACAGGAATACACGTTGTGGCTGACAATCCATATAGTGACGAAGAATTGGGATCAGCGGTTTTAACTGCCGCCGCATTGGAATCAGCTGAGTATAATAGTGTGGAAGAGGCGTACAAAGCATATGTGGCTTTTGCGAATGCGACTGGATTTGCTGTACGAAAGGGTGATTCTGTGAAAAATGAGGAAGAGAATATCGTGCAGAAGTTCTTTTATTGCAATCGACAAAGTTTGCATGAGAAGAAGCACTATGAGAGGGTCGATAGGAAGAGGGCTCATAAAGCAGAGACCAGAACCAATTGTTATGCCAAGTATGTTGTATACTTGGACATGAGTTCTAGAAAGTGGAGGACAAAAACGTTAATTGTGGATCATAATCACGATTTGGCCCCACCGGATTTCACCAACGTAATGGCGCCGCATCGGAAGCTGACTGATGGAGACAAAGCTCACATACACAGCGTGCATGAGGCTGGATTCCAGACAACTCAAATCATAGGGTTCTTTGCTCACTTGTGTGGTGGATATCGGAATGTCAACTTTATCAGGAAGGATTTGTATAACTATATGGATGATGTTAGGCAATCCCGCATTGTTGAAGGGGATGCTGCGGCAGCAATTAGTTATCTAAAGGGTAAGACTGAAATGGATCCGTTAGCAGTTGTAAAATATTCGTACTGCGCTGAGAAGCATCTAGGTAATATTTTTTGGTCAGACGGCTACATGCAATATGATTATGAGTGCTTCGGAGATGTGTTGGCATTTGATTCCACTTACAAGAAGAATCTATACAACAGGCCTCTGGTTATTTTTTCGGGTACTAACCACCATAGGCAGATTATTATGTTTGGATTTGGTTTGCTAGATGATGAAAAGATTCCATCATATAAATGGTTGTTGGGGTGTTTTTTGGAGGTTATGCAGAGTAAGGAACCAAAAGTTGTTGTCACGGATGGTGACGAGTCTATGAAGGAGGCGATTCGTAGTGAGTTCCCTAATACGACCCATCAACTCTATAGCTGGCACCTTGCTCGGAATGCACTTCAAAAAATAAAAGATAGTGATTTCTGTGCTGCGTTCAAGAAAGCTGTGTACGACCATTTTGATGTTAAGGACTTTGAAGATTACTGGGTAGAAGTGGTCCGTAGCTTTGGGTTGGAGGATAATGATTGGATAATTAATTTTTTTATTATTTTAATTTTTTCATCTTAA 1773 0.4337 MNAGMWLSKQRPKSFFDFADHNNLAPRVVSAEDSSCRSCYGLGAFGTVADSVTTASFQVAIRKVVYAGTQPHSRSATFTAVRVAIDVEAAFDLSRFANQISCPRSLVLIVSLFENENFFRQCCRFEMESYGEGSSDFSVQWTDGWSMDSTDDDEGSAARSPEIEEGQSAARDREDGSVAGDEGSMLVPTGIHVVADNPYSDEELGSAVLTAAALESAEYNSVEEAYKAYVAFANATGFAVRKGDSVKNEEENIVQKFFYCNRQSLHEKKHYERVDRKRAHKAETRTNCYAKYVVYLDMSSRKWRTKTLIVDHNHDLAPPDFTNVMAPHRKLTDGDKAHIHSVHEAGFQTTQIIGFFAHLCGGYRNVNFIRKDLYNYMDDVRQSRIVEGDAAAAISYLKGKTEMDPLAVVKYSYCAEKHLGNIFWSDGYMQYDYECFGDVLAFDSTYKKNLYNRPLVIFSGTNHHRQIIMFGFGLLDDEKIPSYKWLLGCFLEVMQSKEPKVVVTDGDESMKEAIRSEFPNTTHQLYSWHLARNALQKIKDSDFCAAFKKAVYDHFDVKDFEDYWVEVVRSFGLEDNDWIINFFIILIFSS 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02396 590 PANTHER OS02G0262500 PROTEIN 216 581 - -
Aip02g02396 590 MobiDBLite consensus disorder prediction 152 179 - -
Aip02g02396 590 MobiDBLite consensus disorder prediction 141 184 - -
Aip02g02396 590 Pfam FAR1 DNA-binding domain 229 317 IPR004330 -
Aip02g02396 590 Pfam MULE transposase domain 439 533 IPR018289 -
Aip02g02396 590 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 216 581 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02396 Aip-Chr2 97071592 97074154 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip02g02396 MULE 5.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02396 - - ahf:112730459 994.186