Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02345 ATGGAAGAAAGCCATGGATCCCAATGTTCCAAGACAAGCCCTTCAAACCTTGAGGAAGAAGAAGAAGAAGAAGAAGAAGACGACGACGAATGCGAAAACAAGAAGAATAATGGAGGAGGAGGAGGAGGGTGTTCAAGCAATAGCACAGTGGAAGAGAATAGTAATAATAATAATGATAAGAAGAAAATAAGGCCTTATGTTAGATCCAAGTTTCCAAGGCTTCGTTGGACACCTGATCTTCACCTTAGATTTCTTCATGCTGTTCAAAGACTTGGAGGTCAAGAGAGAGCAACCCCAAAACTGGTTCTTCAATTGATGAACATCAAAGGATTAAGTATTGCCCATGTCAAGAGTCATTTACAGATGTTTAGAAGCAAAAAATTGGATGAACCAAATCATCAAGTGTTGGCCAATCATCATAGTAGTCGTCTTATGGATACTGGAGACAGAAATATATATAATCTTAGCCAACTTCCAATGCTTCAAGGGTATAACCCAAGCACAATTTCATCCCACAGATTTGGATATGGGGATAATTCATTCACAAGTGCCTATGAAAAAATGGTGCATAGACCTTTCAATTGGGCTAATAGCATCTTCCGGGTTGGTTCTTCTTCCAATTTTATTGAGCAGCAACAACAACAACAACCAATAATAACAAGTAATAGTAGTTTTAAAATCCATGAACGAAGAAAAGATGATCATGAATTCCTCTCATTTGGTAGTAGTAGTGCACATGATCACTCCCTATGCACTAAAAGATTGAGCAATAATAATAATGTTGGTCTCACCCCATTATTATTATCATCACAAAATCCAAGAACACAAGACAATAATAACAATCATAACATCATCATGCCATTGAAAAGGAAGGCATCACCATCATCATCATCATCATTAGCTACTGAAAAAATTGATTTGGATCTTTCATTAAAATTGAACTCAAGGATAGATGGTGATGATGAAGAAAGAAGAGTGGAATTGGAGGATCATGATGATAATAACAAGAATAATGATGATGATAACAATCTATCATTATCTTTGTACCCTCCTATTCAATCATCAACCTCTAATAATCTTAGAAGCAATAAGTTGAAGGAAGCACAAGATTGTTGCAAGAAGCAAGGGAAAATGGCTAGTACCCTGGATCTGACTATATGA 1161 0.3643 MEESHGSQCSKTSPSNLEEEEEEEEEDDDECENKKNNGGGGGGCSSNSTVEENSNNNNDKKKIRPYVRSKFPRLRWTPDLHLRFLHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMFRSKKLDEPNHQVLANHHSSRLMDTGDRNIYNLSQLPMLQGYNPSTISSHRFGYGDNSFTSAYEKMVHRPFNWANSIFRVGSSSNFIEQQQQQQPIITSNSSFKIHERRKDDHEFLSFGSSSAHDHSLCTKRLSNNNNVGLTPLLLSSQNPRTQDNNNNHNIIMPLKRKASPSSSSSLATEKIDLDLSLKLNSRIDGDDEERRVELEDHDDNNKNNDDDNNLSLSLYPPIQSSTSNNLRSNKLKEAQDCCKKQGKMASTLDLTI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02345 386 Coils Coil 17 37 - -
Aip02g02345 386 MobiDBLite consensus disorder prediction 17 31 - -
Aip02g02345 386 PANTHER - 3 386 - -
Aip02g02345 386 MobiDBLite consensus disorder prediction 340 362 - -
Aip02g02345 386 Pfam Myb-like DNA-binding domain 74 122 IPR001005 -
Aip02g02345 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 128 IPR017930 -
Aip02g02345 386 Gene3D - 72 128 - -
Aip02g02345 386 MobiDBLite consensus disorder prediction 322 362 - -
Aip02g02345 386 SUPERFAMILY Homeodomain-like 72 126 IPR009057 -
Aip02g02345 386 MobiDBLite consensus disorder prediction 322 339 - -
Aip02g02345 386 MobiDBLite consensus disorder prediction 1 64 - -
Aip02g02345 386 MobiDBLite consensus disorder prediction 39 54 - -
Aip02g02345 386 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 386 IPR044848 GO:0003700
Aip02g02345 386 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 72 127 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02345 Aip-Chr2 96312935 96316349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02345 63 201 G2-like Transcription Factor Family AT2G42660 50.000 1.17e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip02g02345 Myb_DNA-binding 7.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02345 - - aip:107628479 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02345 02 96312935 96316349 Aip02g02345 02 96312935 96316349 ECH