Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02313 ATGATGGTGGCTGGTTGTTCGTTTATGATGATCACAGTGTGTTACGGTGCTACAGACCCAAATGATCTCAAAATTCTGAATGATTTCAGAAAAGGATTGCAAAATCCCGAGCTTCTCAAATGGCCAGAGAATGGAGTAGGTGACCCATGTGGCAATCCTCCATGGCCTTATGTGTATTGCAATGGTGACAGGGTGACACAGATTCAGTCAAAGAATCTTGGTCTCAAAGATTCACTCCCTCAGAATTTGAACCAGCTCACAGAACTCCATAATTTGGGTTTCCAAAGGAACAACCTCAGCGGGGTTTTACCAAGTTTCAATGGATTGTCCAAATTGGAATATACTTTCTTGGATTACAATGAATTTGACACAATCCCTTTTGATTTCTTCAAAGGACTCACAACATAA 408 0.4093 MMVAGCSFMMITVCYGATDPNDLKILNDFRKGLQNPELLKWPENGVGDPCGNPPWPYVYCNGDRVTQIQSKNLGLKDSLPQNLNQLTELHNLGFQRNNLSGVLPSFNGLSKLEYTFLDYNEFDTIPFDFFKGLTT 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02313 135 Pfam Leucine rich repeat N-terminal domain 20 61 IPR013210 -
Aip02g02313 135 PANTHER OSJNBA0070M12.3 PROTEIN 5 134 - -
Aip02g02313 135 SUPERFAMILY L domain-like 18 134 - -
Aip02g02313 135 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 5 134 - -
Aip02g02313 135 Gene3D Ribonuclease Inhibitor 20 135 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02313 Aip-Chr2 95716641 95717048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02313 14 131 Strubbelig Receptor Gene Family AT3G14350 32.394 5.34e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02313 - - cam:101493565 210.69