Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02310 ATGGACATGGACGTCGACGAAGCTTCTCGCCCCAAAGAGGGAAAGACCATTTTGGTCATTTTAGTGGGAGCACCGGGAAGTGGCAAATCAACTTTCTGTGAAGAAGTGATGCGTTCTTCAACTCGCCCTTGGATTCGCGTTTGCCAGGATACCATTGGAAATGGTAAAGCAGGAAGTAAAGCTCAATGTCTGAGCAGTGCAGCTAGTGCATTGAAGGATGATAAGAGTGTGTTTATTGATAGGTGCAATCTTGACAGAGAGCAGCGCTCCGAATTCGTAAAGCTAGGTGATGTGCACAAAATCGATGTGCATGCAGTTGTGCTTGATCTTCCTGCTAAACTTTGTATTTCTCGATCCGTTAAACGGACTGGCCATGAAGGAAACCTTCAGGGTGGAAAAGCTGCAGCAGTTGTGAATAGAATGCTTCAAAAGAAAGAGCTGCCCAAATTAAGCGAAGGCTATAGCCGGATAACATTTTGTCAGAGTGAGAGTGATGTCAAAGGTGCCATTAATACATACGGCTCACTTGGGCCACTGGATAACCTCCCACGTGGCTGCTTTGGCCAGAAAAATCCAGATTCAAAAGTTCAAGTTGGTATAATGAAGTTCCTCAAAAAGGTGCCAGCCCCTGATGCAGCAGCAAGACCTGATGGAAGTGGAGACACTACGTCCCAAAATCCTGGAAAAAATGATTATTTCCACAAAGATGTAGAAATGGCATCCCCAATTCTAGATAATCCCAACTTAGAGTCAAAGGAAGGAGAAAGCCAGGAAGTGGCCTTCGATGGTTCCCATGCCAGTCGAGTTTCTCTGGATGATGCTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTCAATTATGAAAAGGCAGCTGATATTATTGTTGAGAAGGTTGCGGAGTTTACAGCTAAGCTTGGCAATGCTAGACTTGTGCTGGTTGATTTGACTCATAAATCAAAGATTCTTTCCTTAGTTAAAGCCAAAGCATCTGAAAAACACATTGATACCCAAAAGTTTCTTACCCACGTCGGTGACATTACTAAACTTCATTCTACAGGAGGTTTAAACTGTAATGTCATAGCTAATGCTGCCAACTGGCGGTTAAAACCTGGTGGTGGAGGTGTTAATGCAGCCATTTTTAACGCTGCGGGTCCTGAACTGGAGTCTGCAACCAAAGAAAGAGCAAAATCTCTTTCACCTGGAAATGCTGTTGTTGTCCCTCTACCTGCATCTTCTCCTTTGTTTGTTACAGAGGGTGTAACCCATGTCATACATGTTCTTGGACCTAATATGAACCCTCAAAGACCAAATTGTCTTAACAATGATTATGAAAAAGGATGCAAAATTCTTCAAGATGCTTATGCTTCCCTATTTGAAGGCTTTGCATCAATTACGAGGACCCAGGCAGGGCAATCTAGAGAAGAAAATGAAAACATTGTAAAAAAGGCTTTGAAATTGCAGGATAAATCTGAATGTCATTCCAGAAATAATTTGACAAATATTGATCAAAAGACCAAGAGAGATGCCGATCATGGGTCTGAGAAGAGCAAAAAATGTAAGGGAATTCAGGATAGTTTTGGAGTGAGCTCTGATTCTAGAGACGAAAGGGTAGATTCGGAGCATAGAAGAAATGATGGGAGCATGAATAAGGCATGGGGATCATGGGCACAAGCTCTTCATCAAATGGCTATGCATCCTGAGAAGCATAAAAATGACTTGCTTGAGATTTCAGAGGATGTTGTTGTTCTGAATGATCTCTATCCTAAGGCAAAGAAACATGTTCTCATTTTGTCTCGTACCCGAGGAGTTGATTGCCTGGAAGATGTCCAGAAAGAACACATTCAGTTGCTGAAGAAGATGCATGATGTGGGTTTAAAGTGGGCCAGGAAGTTCCTAGATGAGAATGCTTCACTGGTCTTTCGCCTTGGATATCACTCAGCTCCGTCAATGCGACAACTGCATTTACATGTTATCAGCCAGGACTTTGATTCAAAACATTTGAAGAACAAGAAGCACTGGAACTCATTCAACACTGCTTTCTTTCGCGACTCGATAGACGTAATGGATGAGGTCTCTAGTCACGGGAAAGCAACACTGAAAGATGATGATAAGCTGTTGTCCATGGAGTTGAGGTGCCACAGATGTAGAAGTGCGCATCCAAACATACCCCGGTTGAAATCGCATATTGGCAGCTGCAAAGCTCCTTTTCCTGCTTNTGAATGA 2235 0.4286 MDMDVDEASRPKEGKTILVILVGAPGSGKSTFCEEVMRSSTRPWIRVCQDTIGNGKAGSKAQCLSSAASALKDDKSVFIDRCNLDREQRSEFVKLGDVHKIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGYSRITFCQSESDVKGAINTYGSLGPLDNLPRGCFGQKNPDSKVQVGIMKFLKKVPAPDAAARPDGSGDTTSQNPGKNDYFHKDVEMASPILDNPNLESKEGESQEVAFDGSHASRVSLDDAPTLAFPSISTSDFQFNYEKAADIIVEKVAEFTAKLGNARLVLVDLTHKSKILSLVKAKASEKHIDTQKFLTHVGDITKLHSTGGLNCNVIANAANWRLKPGGGGVNAAIFNAAGPELESATKERAKSLSPGNAVVVPLPASSPLFVTEGVTHVIHVLGPNMNPQRPNCLNNDYEKGCKILQDAYASLFEGFASITRTQAGQSREENENIVKKALKLQDKSECHSRNNLTNIDQKTKRDADHGSEKSKKCKGIQDSFGVSSDSRDERVDSEHRRNDGSMNKAWGSWAQALHQMAMHPEKHKNDLLEISEDVVVLNDLYPKAKKHVLILSRTRGVDCLEDVQKEHIQLLKKMHDVGLKWARKFLDENASLVFRLGYHSAPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTAFFRDSIDVMDEVSSHGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHIGSCKAPFPAXE 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02310 744 Gene3D Leucine Aminopeptidase, subunit E, domain 1 318 469 IPR043472 -
Aip02g02310 744 Pfam Macro domain 365 443 IPR002589 -
Aip02g02310 744 MobiDBLite consensus disorder prediction 533 551 - -
Aip02g02310 744 Pfam Scavenger mRNA decapping enzyme C-term binding 570 676 - -
Aip02g02310 744 Pfam AAA domain 18 144 - -
Aip02g02310 744 MobiDBLite consensus disorder prediction 498 552 - -
Aip02g02310 744 SMART YBR022w_8 342 484 IPR002589 -
Aip02g02310 744 MobiDBLite consensus disorder prediction 210 265 - -
Aip02g02310 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 160 IPR027417 -
Aip02g02310 744 MobiDBLite consensus disorder prediction 504 525 - -
Aip02g02310 744 PANTHER APRATAXIN 15 742 IPR026963 GO:0003677|GO:0006281|GO:0033699
Aip02g02310 744 SUPERFAMILY Macro domain-like 324 463 IPR043472 -
Aip02g02310 744 ProSitePatterns HIT domain signature. 645 663 IPR019808 -
Aip02g02310 744 Pfam C2HE / C2H2 / C2HC zinc-binding finger 681 733 IPR032566 -
Aip02g02310 744 PANTHER APRATAXIN-RELATED 15 742 - -
Aip02g02310 744 Gene3D - 558 738 IPR036265 -
Aip02g02310 744 SUPERFAMILY HIT-like 561 720 IPR036265 -
Aip02g02310 744 Gene3D - 3 173 IPR027417 -
Aip02g02310 744 ProSiteProfiles Macro domain profile. 330 513 IPR002589 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02310 7 741 C2H2 Transcription Factor Family AT5G01310 59.184 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02310 K10863 - gmx:100786762 1160.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02310 02 95651791 95656288 Aip02g02310 02 95651791 95656288 ECH