Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02304 ATGGTTGTTGAAAAGGGTTTCATTGATGCTACAAGATGCGGAAACATTGGAAGATTCATAAACCATAGCTGTTCTCCTAATCTTCAAGTCATGGAGGTTATGTATGATGACAATGATAAGAACCTTCCCCATAAAATCTTTTTTGCATTACAGGACATACCTGCTGGAAGAGAGCTGAGTTTTGATTACAACATCTGCAAGCCAAGGGTTATCGGGACTGGCAGCAACATTTGCCAATGTGTCCTCGCCGCTGGATCTCACCGTGAGGGTGGACGTCGCCCGCCGGGAGTCGTTTCTGCTCCTCCTCCTCGCCATCGCACCTCGTCTCGTTTTCTGGATTCTTGTTTTTCTGAGTTAATGGTTCTGAGTTTTGATGATGATGATGATGATGATGATGATGATTTTCTGAGTTCTGGGTGGGGTGATGCACATGCTGATGGAGTGGTAGTGGGTGGGGGTGGTGGTGGTGGGTTCTGA 477 0.4675 MVVEKGFIDATRCGNIGRFINHSCSPNLQVMEVMYDDNDKNLPHKIFFALQDIPAGRELSFDYNICKPRVIGTGSNICQCVLAAGSHREGGRRPPGVVSAPPPRHRTSSRFLDSCFSELMVLSFDDDDDDDDDDFLSSGWGDAHADGVVVGGGGGGGF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02304 158 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 2 86 - -
Aip02g02304 158 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 2 86 - -
Aip02g02304 158 ProSiteProfiles SET domain profile. 1 64 IPR001214 GO:0005515
Aip02g02304 158 Gene3D SET domain 2 69 IPR046341 -
Aip02g02304 158 SUPERFAMILY SET domain 6 70 IPR046341 -
Aip02g02304 158 Pfam SET domain 14 64 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02304 Aip-Chr2 95588465 95590139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02304 7 68 Su(var)3-9 homologs AT5G04940 43.548 3.87e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip02g02304 SET 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02304 - K11420 aip:107625781 173.326