Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02303 ATGAACCTCACTCTCTATCACTTAGGAATGGAGGATTCAAAATCATTTGGAATAAAGCAAGAAGGGTATCATAATCCTTCATCCATCATGAAAACAGAGGAATTCTCGTTCCGACGCAGCAAAGTGAAGCAAGCATTGATGATATTTCGGAACTTGTTTTCAAAACTCTTTAGCGAGTACAAAACAGATCACTATGATAATGTGAAAGCAAAATTTAAAGCTTTGAGTGATGCTGCAATGTTGATGCAGAGGAAGCATCAATGGGTGAACTGCCAAAAACGGGTGGGACATGTCCCTGGGATTGAAGTTGGAGACCGATTTCAGTATAGGAATGAACTCAATGTCGTCGGCCTCCATCGCCAGTTTGTCAATGGAATCGATTACGTGGGTAAGGGCAAGAACTCTTTAGCCACAAGCATTGTTGTAACCAATCGCTACGATAATGCTAGAAATCATGGTGGTTCATTGGTTTATAGTGGTCAGGGATGGAATCCTAATGTGAAAGGTGGATCTATGCCCCGTGATCAAAAGTTGGCTGGCGGAAATCTTGCTTTGAAGAATAGCATGGATGCTAAGAGTCCTGTGCGGGTTATATTGAAGGTTGATGGAAAATCTGGTGGAGGCATAGAGAAGAAAACCAATGATAAATTCTCATATATATATGATGGATTGTATTTGGTTGAGAAGATGACACAAGAAAGAGGAACTCATGGGAAACTTGTATTCAAGTTTTTGTTGAACAAACTTGGAGAGCTACCTTCAACTTGTGTTCTCCACAAGGATGAGGTTATCAAGAATGTCAATAAATTTGGGCAACTTGATATTTTCACTTTGAGGAAAAGGCTCAAAACTAAAGGTTGTGCAACTAAAAATGATGTTATTATCATGAATGATATCTCCAACGGACAAGAGAAGTTTCCTATTCGAGTCGTTGCATCAACTGATGGTATTAAAATGCCTCCATCTTTTGATTACATAGTAAACAACATTTATGTTGATAGCTTCGAGAAGCGAATGTTATGTGGTTGTGACTGTGTAAATGGATGTGTGGATTGGGAGAAATGTGTCTGTATTGTTAAGAATGGTGGAACAATACCATATGACTCTAAGAAAAGACTTGCTTCTGGATTGGAATCATGTGTTATATACGAGTGCGGCTCTTCTTGCAAGTGTTCCTCGTCTTGCTACAACCGATTAAGTCAACATGGCCTTCAATTCCAACTTGAAATCTTCAACTCCGAATCAAAGGGCTGGGGTGTTAGAANNNNNNNNNNNNNNNGGATCTAG 1287 0.3908 MNLTLYHLGMEDSKSFGIKQEGYHNPSSIMKTEEFSFRRSKVKQALMIFRNLFSKLFSEYKTDHYDNVKAKFKALSDAAMLMQRKHQWVNCQKRVGHVPGIEVGDRFQYRNELNVVGLHRQFVNGIDYVGKGKNSLATSIVVTNRYDNARNHGGSLVYSGQGWNPNVKGGSMPRDQKLAGGNLALKNSMDAKSPVRVILKVDGKSGGGIEKKTNDKFSYIYDGLYLVEKMTQERGTHGKLVFKFLLNKLGELPSTCVLHKDEVIKNVNKFGQLDIFTLRKRLKTKGCATKNDVIIMNDISNGQEKFPIRVVASTDGIKMPPSFDYIVNNIYVDSFEKRMLCGCDCVNGCVDWEKCVCIVKNGGTIPYDSKKRLASGLESCVIYECGSSCKCSSSCYNRLSQHGLQFQLEIFNSESKGWGVRXXXXXXI 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02303 428 ProSiteProfiles YDG domain profile. 96 248 IPR003105 -
Aip02g02303 428 Pfam Pre-SET motif 299 398 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aip02g02303 428 Gene3D - 77 270 IPR036987 -
Aip02g02303 428 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 25 423 - -
Aip02g02303 428 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 25 423 - -
Aip02g02303 428 Pfam SAD/SRA domain 95 249 IPR003105 -
Aip02g02303 428 SUPERFAMILY SET domain 288 421 IPR046341 -
Aip02g02303 428 Gene3D SET domain 273 425 IPR046341 -
Aip02g02303 428 ProSiteProfiles Pre-SET domain profile. 341 403 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Aip02g02303 428 SMART G9a_1 91 251 IPR003105 -
Aip02g02303 428 SUPERFAMILY PUA domain-like 78 253 IPR015947 -
Aip02g02303 428 SMART preset_2 296 390 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02303 Aip-Chr2 95586474 95588436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02303 74 421 Su(var)3-9 homologs AT1G73100 37.183 2.10e-54 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02303 - K11420 aip:107627681 848.195