Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02296 ATGTACGTTGCATCTTCGGGGGGCTCTCAGGCGCGGGAGAATGCTCCATTGAAAGATGGTTCAAGCATCAATCAGCTTTTTAGTATTAAAGGAGCTGCTCAAGAATCAAATAAATGGAAGATTCGACTTCAACTTACAAAACTTGTCACTTGGCCTCCATTGGTTTGGGGTGTAGTTTGTCGTGCCGCTGCTTTTGGAAATTTCCATTGGACTATTGAGGATGTTGCTAAATCAATTGTGTGCATGTTGATGTCTGCCCTGTTTCTAACAGGATATACTCAGAATATAAATGATTGGTATGACCGACGAATTCCTTCTGGGGCTATATCTGAGAACGAGGTGCGTTATCACTCAAATATGAGTGCTGCTACTAGGAGGTCTTGGCTTGGCAGGTCTAATAGACGTATGGGTAGTATTAAGAATAATCTGGAGCCGAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGCTGAAGGAGTTTCCACAATATTTCTCATTTAGCTTAGAGAACAGAATTAAGCCGAGGCATAAACGCTGCATAGAAATGGGGGTGTGTTTCCCTCTTCCTGTGTTGTTAAAGATGACTGAAACGAGCTTTCAAAATAGGTTAGATGTGTGTATAAATTCTTCAACACCCTTGAAAAAATCTCCTCTCTGGTGTGATGCTTGTGATATTCAAGTATAG 696 0.4138 MYVASSGGSQARENAPLKDGSSINQLFSIKGAAQESNKWKIRLQLTKLVTWPPLVWGVVCRAAAFGNFHWTIEDVAKSIVCMLMSALFLTGYTQNINDWYDRRIPSGAISENEVRYHSNMSAATRRSWLGRSNRRMGSIKNNLEPKYNYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKRCIEMGVCFPLPVLLKMTETSFQNRLDVCINSSTPLKKSPLWCDACDIQV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02296 231 Pfam mTERF 140 204 IPR003690 GO:0003690|GO:0006355
Aip02g02296 231 PANTHER CHLOROPHYLL SYNTHASE 8 116 - -
Aip02g02296 231 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Aip02g02296 231 SMART mt_12 158 189 IPR003690 GO:0003690|GO:0006355
Aip02g02296 231 Gene3D Transcription termination factor 3, mitochondrial 117 210 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02296 Aip-Chr2 95493408 95496575 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip02g02296 mTERF 1.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02296 K04040 - ahf:112704905 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02296 02 95493408 95496575 Aip02g02296 02 95493408 95496575 ECH