Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02282 ATGACAACCCGCTTGAAGAAGAATCGCAAGAAGCGCGGTCACGTGAGCGCTGGGCACGGTCGTATCGGAAAGCACCGCAAGCATCCTGGAGGTCGTGGTAACGCCGGTGGCATGCACCACCACCGAATCCTATTTGACAAGTACCATCCCGGATACTTCGGTAAGGTAGAGGTGAAGGATAAGGCTTCCGAGGAGAAGAAGGCTCCGTTGATCGATGTCACGCAGAACGGTTACTTCAAGGTCTTGGGAAAAGGTGTACTCCCTCAGAATCAGCCTGTTGTCGTGAAGGCTAAGCTTATTTCCAAGCTCGCTGAGAAGAAGATCAAGGAGAATGGCGGCGCCGTCCTTCTCACCGCATAA 360 0.5333 MTTRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVEVKDKASEEKKAPLIDVTQNGYFKVLGKGVLPQNQPVVVKAKLISKLAEKKIKENGGAVLLTA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02282 119 MobiDBLite consensus disorder prediction 1 35 - -
Aip02g02282 119 PANTHER 60S RIBOSOMAL PROTEIN L27A-3 1 58 - -
Aip02g02282 119 SUPERFAMILY Ribosomal proteins L15p and L18e 6 118 IPR036227 -
Aip02g02282 119 Gene3D - 37 119 - -
Aip02g02282 119 PANTHER 60S RIBOSOMAL PROTEIN L27A 1 58 - -
Aip02g02282 119 PANTHER 60S RIBOSOMAL PROTEIN L27A 57 119 - -
Aip02g02282 119 MobiDBLite consensus disorder prediction 1 38 - -
Aip02g02282 119 ProSitePatterns Ribosomal protein L15 signature. 80 112 IPR001196 GO:0003735|GO:0005840|GO:0006412
Aip02g02282 119 PANTHER 60S RIBOSOMAL PROTEIN L27A-3 57 119 - -
Aip02g02282 119 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 67 115 IPR021131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02282 Aip-Chr2 95190070 95190513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02282 1 119 Cytoplasmic Ribosomal Protein Gene Family AT1G70600 68.027 1.38e-61 183