Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02274 ATGTGCCTCCCATTTCCTCATGTTTCCGATGGCAGAACTCGTCATGCCGACCAGGGAGCATTCAAAAACATGTGCCACGGTAGACGCATGTTCACACTGATGAAGATCTGGCGCCGCAACATCAATGTCGACCATAAGCGGTACGTCGTCATTTTCGCTGTTGCCGCCTTAGCCATTCCCTTACTCGTCATCACACGCAGCCACTGTATTAACACTGTGCCAAATCTCCCTCTCGTTGTCTCAGATGATGCGGAAGTTGTTGAGAAGACAAAGGAAATAATCAATGTCTTGAGATCCACACAATTCACCTTGGGAAGGAAAAAATGCGTAACTCGCGATACATTTCAAGAAGGAACCTCCTATTGTGTACGAAATCGAATGATCTAA 387 0.4651 MCLPFPHVSDGRTRHADQGAFKNMCHGRRMFTLMKIWRRNINVDHKRYVVIFAVAALAIPLLVITRSHCINTVPNLPLVVSDDAEVVEKTKEIINVLRSTQFTLGRKKCVTRDTFQEGTSYCVRNRMI 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02274 128 PANTHER 60S RIBOSOMAL PROTEIN L4 6 120 IPR045240 -
Aip02g02274 128 SUPERFAMILY Ribosomal protein L4 10 110 IPR023574 GO:0003735|GO:0005840|GO:0006412
Aip02g02274 128 Gene3D - 4 127 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02274 Aip-Chr2 94993565 94993951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02274 6 98 Cytoplasmic Ribosomal Protein Gene Family AT5G02870 53.125 1.25e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02274 K02930 - aip:107633893 104.375