Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02268 ATGGGTGTGGACTACTACAAAATTCTACAGGTAGATCGAGGTGCGAAAGATGATGATCTCAAGAAAGCGTATCGGAAGCTTGCAATGAAGTGGCACCCTGACAAGAACCCTAATAACAAGAAGGAAGCTGAAGCCAAATTCAAGCAAATCTCTGAAGCCTATGATGTGTTGAGTGATCCACAAAAACGAGCAGTGTATGATCAGTATGGAGAGGAGGGATTGAAGGGGCAGGTGCCACCCCCAGGAGCTGGTGGATTTTCTGCCGCAGATGGTGGGCCAACGACGTTCCGGTTCAACCCCAGAAGTGCTGATGATATTTTCTCGGAGTTTTTTGGGTTTTCAAGCCCCTTCGGTGGAATGGGTGATATGGGCGGCCGTCCAGGTGCATCTGGATTTCCCAGGGGCATGTTTGGTGATGATATCTTCACTTCGTTTAGGCATCCAGCTGGAGAAGGCTCTACCAATATGCCAAGGAAAAGTGCACCGATCGAGAGAACATTGCAGTGCAGTTTGGAGGATTTGTACAAAGGGACCACCAAGAAAATGAAGATCTCCAGGGATGTTACAGATGCCAGCGGGAGAGCCACCACAGTAGAGGAAATTCTGACAATCGAGATCAAGCCAGGTTGGAAGAAGGGAACAAAAATAACTTTCCCGGAGAAGGGGAATGAACAGCGAGGAGTTATACCGGCTGACCTAGTTTTCATTATTGATGAGAAGCCTCATAGCCTCTTCAAAAGAGATGGCAATGATCTTGTTGTGACGCAGAAGATTTCTCTAGTAGAAGCTCTCACGGGTTACACGGCGCAACTGACAACCCTTGACGGGCGAAGCATCTCCGTCCCCATCAACTCCATCATTAGTCCCTCATATGAAGAAGTAGTCAAAGGCGAGGGCATGCCAATCCCCAAAGAACCTTCCAAAAGGGGGAACTTGAGAATCAAGTTCAATATCAAGTTTCCATCGAGGCTTACGTCCGAGCAAAAAGCCGGCATTAAGCGGTTATTGACCTCTCCATAA 1020 0.4794 MGVDYYKILQVDRGAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFSAADGGPTTFRFNPRSADDIFSEFFGFSSPFGGMGDMGGRPGASGFPRGMFGDDIFTSFRHPAGEGSTNMPRKSAPIERTLQCSLEDLYKGTTKKMKISRDVTDASGRATTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTAQLTTLDGRSISVPINSIISPSYEEVVKGEGMPIPKEPSKRGNLRIKFNIKFPSRLTSEQKAGIKRLLTSP 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02268 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 245 330 IPR008971 GO:0006457|GO:0051082
Aip02g02268 339 Gene3D DnaJ domain 3 121 IPR036869 -
Aip02g02268 339 CDD DnaJ 4 59 IPR001623 -
Aip02g02268 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Aip02g02268 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Aip02g02268 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Aip02g02268 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Aip02g02268 339 Gene3D - 162 240 - -
Aip02g02268 339 CDD DnaJ_C 161 324 - -
Aip02g02268 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 163 242 IPR008971 GO:0006457|GO:0051082
Aip02g02268 339 Gene3D - 242 322 - -
Aip02g02268 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Aip02g02268 339 MobiDBLite consensus disorder prediction 73 93 - -
Aip02g02268 339 Pfam DnaJ C terminal domain 163 321 IPR002939 -
Aip02g02268 339 SMART dnaj_3 3 62 IPR001623 -
Aip02g02268 339 Pfam DnaJ domain 4 67 IPR001623 -
Aip02g02268 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Aip02g02268 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 337 - -
Aip02g02268 339 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 337 - -
Aip02g02268 339 SUPERFAMILY Chaperone J-domain 3 98 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02268 Aip-Chr2 94710910 94714807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02268 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 1.93e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02268 K09510 - nnu:104602593 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02268 02 94710910 94714807 Aip02g02268 02 94710910 94714807 ECH
Aip04g02132 04 99179929 99183324 Aip02g02268 02 94710910 94714807 PCT