Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02260 ATGGGGTCTAGGAGCCATGAAGAATCACCATGGCTATTGGAAAATGGGAATCCAAAGGTGTTGACCAAGGATATGAGACATGGAAGAACAGCACACAACATGTCATCATCTTCTTTGAGGAAAAAATCTGAACTCACTGTTATTTCAAAGGTTCCCTATGGATTCCTCAGAAACTTTCTTGCTAACTTGCAAGAGGTTTTTCTTGGAACCAAGCTTTTCATTCTCTTCCCATCAATTCCTCTTGCTATCATTGCCCATTGTTTTGGTTTTGCAAGACCATGGGTTTTTGCCATGAGCTTACTTGGTTTAACCGTACTTGCTGAAAGAGTCAGCTTCATGACTGAGCAAGTCGCTTGTTACACCGGTCCCACAGTTGGAGGACTTCTGAATGCTACATGTGGGAATGCAACAGAGCTTATCATAGCAATTTTTGCACTTAGTAACAACAAAATTGCTGTGGTCAAGTATTCTCTTCTTGGTTCTATACTTTCAAACCTTCTTTTGGTTCTTGGCACTTCCCTACTTTGTGGTGGCATTGCAAATCTTAGGCAGGAACAAAAATATGAGAGAAGGCAAGCTGATGTGAACTCTCTTATGCTGCTTCTGGGATTGTTGTGCCACATGCTCCCACTGCTGTTCAGATATGGCGGCGGCTCACCGGCTGTGGTGGCCGAGGCATCCTTGAATGTGTCTAGAGCTGCTAGCCTTGTGATGTTGTGTGCTTACTGTGCTTACATTGCCTTCCAACTTTGGACTCACCGGCAACTATTCGAAGCACAAGTAGATAATGATGATGAAGGTCAAAATGATTCAGAAGAAGCAGTGATAGGTTTCTGGAGTGGGATTGGTTGGCTTGTTGGAATGACTGCAATTATTGCTCTCTTGTCTGAATATGTGGTGCAGACTATAGAGGATGCATCAAATTCATGGGGTTTGTCTGTGAGTTTCATCAGCATAATCTTGCTCGCAATCGTTGGCAATGCCGCCGAACATGCTGGAGCTATCATATTTGCTTTCAAGAACAAACTGGACATCACATTAGGTGTTGCTTTGGGGTCTGCAACTCAGATTAGCATGTTTGTGGTTCCAGTGTGTGTGATTGTTGGTTGGATTCTTGGCATAAAAATGGACCTCAACTTCAACCTCTTGGAGACAGGTTCTCTTGCTTTGGCAATAATTGTCACAGCCTTTACAttacagGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCCTTCTATGCTACATTGTTATTGGGGCCTGCTTTTTCGTTCAGACAACACCCTCTGATCAACTTAATGATGAAGTTCATAATGTGATGCTTAAACCAGCAACCGATGCAGTTTTTAGAGCTTAA 1359 0.4283 MGSRSHEESPWLLENGNPKVLTKDMRHGRTAHNMSSSSLRKKSELTVISKVPYGFLRNFLANLQEVFLGTKLFILFPSIPLAIIAHCFGFARPWVFAMSLLGLTVLAERVSFMTEQVACYTGPTVGGLLNATCGNATELIIAIFALSNNKIAVVKYSLLGSILSNLLLVLGTSLLCGGIANLRQEQKYERRQADVNSLMLLLGLLCHMLPLLFRYGGGSPAVVAEASLNVSRAASLVMLCAYCAYIAFQLWTHRQLFEAQVDNDDEGQNDSEEAVIGFWSGIGWLVGMTAIIALLSEYVVQTIEDASNSWGLSVSFISIILLAIVGNAAEHAGAIIFAFKNKLDITLGVALGSATQISMFVVPVCVIVGWILGIKMDLNFNLLETGSLALAIIVTAFTLQDGTSHYMKGLVLLLCYIVIGACFFVQTTPSDQLNDEVHNVMLKPATDAVFRA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02260 452 Pfam Sodium/calcium exchanger protein 94 251 IPR004837 GO:0016021|GO:0055085
Aip02g02260 452 Pfam Sodium/calcium exchanger protein 282 419 IPR004837 GO:0016021|GO:0055085
Aip02g02260 452 TIGRFAM cax: calcium/proton exchanger 78 424 IPR004798 GO:0006816|GO:0015369
Aip02g02260 452 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 5 437 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aip02g02260 452 TIGRFAM caca2: calcium/proton exchanger 58 424 - -
Aip02g02260 452 Gene3D - 123 424 IPR044880 -
Aip02g02260 452 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 5 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02260 Aip-Chr2 94528454 94533718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02260 10 433 Antiporters AT2G38170 70.507 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02260 K07300 - gmx:100782052 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02260 02 94528454 94533718 Aip02g02260 02 94528454 94533718 ECH
Aip04g02109 04 97965735 97968964 Aip02g02260 02 94528454 94533718 PCT