Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02256 ATGGTTGTGTTGCCGAATTGCTACCATTCGATGTGTATGAAATGCTACCGAGACTGGCACGCGCGATCGCAGTCTTGCCCTTTCTGCCGGGATAGCCTTAAAAGAGTGAACTCCGGCGACCTGTGGATATATATGAGCAACAAGGAAATAGATGACTTGGCTTCAATCAACAAGGAGAACTTAAAGAGGCTGTTTATGTACATTGATAAGTTACCTCTAGTTGTGCCAGCTCCTATGTTCATGACTTATCCTCCACATCGTTTCTGA 267 0.4494 MVVLPNCYHSMCMKCYRDWHARSQSCPFCRDSLKRVNSGDLWIYMSNKEIDDLASINKENLKRLFMYIDKLPLVVPAPMFMTYPPHRF 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02256 88 ProSiteProfiles Zinc finger RING-type profile. 7 30 IPR001841 -
Aip02g02256 88 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 76 - -
Aip02g02256 88 Pfam Zinc finger, C3HC4 type (RING finger) 2 35 - -
Aip02g02256 88 PANTHER RING FINGER PROTEIN 41, 151 1 76 - -
Aip02g02256 88 ProSitePatterns Zinc finger RING-type signature. 7 16 IPR017907 -
Aip02g02256 88 SUPERFAMILY RING/U-box 2 35 - -
Aip02g02256 88 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 66 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02256 Aip-Chr2 94435088 94435741 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02256 K25840 - gmx:100819267 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02256 02 94435088 94435741 Aip02g02256 02 94435088 94435741 ECH
Aip04g02102 04 97729594 97733219 Aip02g02256 02 94435088 94435741 PCT