Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02249 ATGGGGGTTGATCCCAACAAGTCTAATTTTGTTGCTGCATTGTATGCTAAGTTTCTTCCAAAGTCTATGTGGGATAAGAAAGTTGAGTTGTACAAGAGTTTTGGATTAACTGATGACAACATTCGTGAGGCGTTTGTGAAGCACCCTTTCTGTATGCTAAAATTTGTGCAGAAAATTGAGGCCTGCATTGGATTCTTTGTCAAAGAACTCGGTTGGGAGCCTGCTGAAGTAACCAATAATCCGGTTCTTCTCTCGCTGAATTTGGACAAAAGGGTTGTTCTGAGGGCTGTTGTTGCTATTGTTGGTGTAGTGATGACTGATGATGCagggatgcaggggatagtgTGCAGAATTCCAGCAGCAGCAACCATTGAAACGCCGCTAGCCTTCCCTCCTCCAGAACCGGAACTTGTGGTGAGAATTGGGTCAAGTAAAAGAAGAAATGGCGTTCAGAGGCAAAGAGATGATGAAGAAAGTGTTGAAGAGAGTTGGAGAGAACAATTTGAACCCAAGAGTGAAGGAATCGCTGGAGAAATGTATACCTAG 546 0.4176 MGVDPNKSNFVAALYAKFLPKSMWDKKVELYKSFGLTDDNIREAFVKHPFCMLKFVQKIEACIGFFVKELGWEPAEVTNNPVLLSLNLDKRVVLRAVVAIVGVVMTDDAGMQGIVCRIPAAATIETPLAFPPPEPELVVRIGSSKRRNGVQRQRDDEESVEESWREQFEPKSEGIAGEMYT 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02249 181 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 101 - -
Aip02g02249 181 Pfam mTERF 22 100 IPR003690 GO:0003690|GO:0006355
Aip02g02249 181 MobiDBLite consensus disorder prediction 141 181 - -
Aip02g02249 181 MobiDBLite consensus disorder prediction 148 172 - -
Aip02g02249 181 PANTHER CGI-12 PROTEIN-RELATED 1 101 IPR003690 GO:0003690|GO:0006355
Aip02g02249 181 Gene3D Transcription termination factor 3, mitochondrial 1 103 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02249 Aip-Chr2 94286774 94291664 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip02g02249 mTERF 3.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02249 K15032 - pvy:116132877 87.8113