Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02202 ATGTCTTACTACCAATCAGCAGAAAGAATCCCCGATCCATCATGGAAGTACGATGTGTATTTGAGTTTCCGAGGCCAAGACACTCGCCACGGATTCACCTCACATCTCTATGACGCTTTGAGGAGAGCTGGGATTCATGTTTTCAGGGACGAGGTGGCGCTTGGGAGAGGAGAGCAGATAACATACACACTGATTCAAGCAATCGAAGCTTCTAGACTTTTGGTTGTTGTTTTCTCAGAAAGTTATGCTGGTTCTAGATGGTGTCTGGACGAGTTGATGAAAATAATGGAGTGTATAAGCACTGGAGGTCAAACTGTCATTCCGGTATTCTACAATGTTGATCCCGCAGATGTACGCCACCAGAGAGGTCCTTTTGGAGAAGCTTTTCAAAGTCATAGATTCTCATATGAGAATGAGATAGTCCATGCATGGAGGGCTGCGCTCACTGAAGCTGCTAACCTTTCTGGATTCGCAATCACCGGAGACAGAAATGAAGCTGAAATGATCGGAAAGATTGTTAAACATATAACTACTCTACTTGCTTCGGAAGACTTGTTCATCGCAAAGCATCTAGTGGGAGTACAATCTCGCACGGAAGATGTGATTCAAGAGTTACATTCTCATAAACCAGAAGACGTCGTGTTAATGGGGATATGGGGGATGGGAGGAGTGGGTAAAACAACCATTGCGAAAAGTGTTTATAATCAAATTCGTCACGGTTTTGATAGGCCAATGTTCCTCCCAAACATTCGGGAGATGTGGGAGAATAACCAACAGGTTTTTCTGCAAGAACAGTTATTGAATGGTATTTGCAAAGCACAGATAAACATACAAAACATCGCATCAGGAGTAGCTTTATTAAGGGAAAAACTTCGCCTGAAAAAGGTATTTCTTGTACTTGATGATGTAAATAATATAGACCAGTTGAATGCCTTGTGTGGAAGTCCAGAATGGTTTGGTGCAGGGAGTATAATAATCATCACAACAAGAGATAGAGGTCTGCTTCGTAGGATTGGAGTTGAGTATGTGTACCAAGTGAAAGAAATGGATTACAATGAATCTCTTCAACTTTTTTGTTGGAATGCATTTGGGAAAGCAACTCCTTTAACAGAGTTTGCTAGACTTGCAGAAGATGTAGTTAAATATTGTGGGGGATTGCCATTGGCCCTTATAACAATTGGTTGTCAATTGTTTGGAAAGATGAAAGACGAGTGGGAGAATGTATTAGGTGGACTCAAAAGGTTTCCCCATCCGGATGTACACAAAGTTTTGAAAATAAGCTTTGATGGCTTAAATGATGACAGAGAGAAAGAAATATTTCTTGATATAGCTAGCTTTTGTATTGGCATGGAAAGAGAGGAGGCACTGCAAACACTAAAGGATGCCTTTGGACTCAGCGAATATGGAATTGGTTTCCTTGAAGAGCAGAGTCTTATAACATTTGACGAGAAAGATAGAGTTCGAATGCATCCTTTGCTGCGTGACATGGGAAGAGAAATCGTTCGAGAGCAATCACAAACTGATGCTCAGCGAAGGATGTACGATGTTTTTGTGAGTTTTCGAGGCAAGGACACTCGTCCAACGTTTACATCACATCTCCATACATCTCTCCAAAATGCTGGAATTACTGCTTACAAGGATGATGATGATGTTGATGGACTTCAAAGGGGAGAACGGATTTCAATCGCATTGTTAAAAGCAATTGGATTGTCTGCATGTTCTGTCATTGTTTTTTCAACCCACTATTCTGATTCAAAATGGTGCCTGCAAGAGCTTGAGAATATCATGGTATGCCATAGAACAAAAGGTCAAGTGGTTTACCCTATATTCTATGAAGTAGATCCCTCAGATGTACGTTATCAAAAGAAAGAGACTGACTTTGGGAAAGCTTTTGAAAGTCTTATAAGTCGAAGATCAGTGGAAGAAGATAAGGTGCAAAGTTGGAGAACAGATCTTCGTGAAGTTAGTAGCTTTTCAGGGACGACTGTGATCAACTCCAGGAACGAAAGTGAAGATATCAAAAGAATTGTCGAACACGTTACTCGTTTATTAGATAAGACAGAGTTGTTCGTTGCAGCGCATCCAGTGGGAGTAGAACCTCGTGTGCAAAAGTTGATTGAAGAATCAAACATTCAAAAGATAAAAGATGTTCTAATACTTGGGATAAAAGGCATGGGGGGCGTTGGTAAAACCACTATTGCCAAAGCCATCTATAACAAAATTCGTCGCGATTTTGATGGCAGGAGCTTCCTCCTGAACATTAGAGAAACATGGCAGCAAGATAATGGAAAGGTTCTCTTGCAACAGCAACTTCTTGAGGATATATTCATTGCAACAAGGATACACATAAGTAACATTGATTCAGGGAAGCAAATATTAAAGGAAAGGCTTGGTGCTAAAAGGGTACTCATTGTGCTTGACGATGTGACTGATTTGGACCAACTCAATGCTTTGTGTGGTAGTGGTGAATGGTGTCGTCCTGGGAGCGTAGTAATCATCACAACAAGACATGATGATCTTCTTCGAGTGTGTAAACTCACATTCAATCTAGAAGAGATGAATGGGGCTGAATCCCTTGAACTTTTTAGCTGGCATGTATTCAAACAAGCATGTCCAAAAGATAAGTTTGTCAAGCTATCTACAGATGTAGTTGAATATTCTAATGGATTGCCACTGGCTCTGGAAGTTCTTGGGTCCCATTTGTTTAATATGGGAATAATAGAATGGCAAAGTGCATTGGATACTCTGAAATTAATTCCCCATGATAAAGTCCAGAAGAAACTACAAATAAGTTTTGATGGTTTAAGTAAGAATTATGAAAAAGAAATATTCCTTGACATTGCATGCTTTTTTATTGGGATGGATCGAAATGATGTTGTGAAGATATTAAATGGTTGCGGACTCCATGCAGAAATTGGAATCAGTGCCCTTAAAGCGCGAAACCTTGTAACTGTTGATAACAATATGCTTGGAATGCATGACTTGTTAAGAGATATGGGAAGAGCAATAATTTGTGAGCAATCACCTGAACTTGAAGAGCGAAGTAGATTATGGTATGATGAGAAAGTGCTTGAACTATTAGAGAATCATGAGGGAACAGATTTAAAGGCTAAGGGATTGAGTTTGAAGCTGCCAATGACCAATTCCATTTGTTTGAGTAAAGAAGCATTTAAGAATATGACTAAACTTAAATTGCTTCAACTCGCGGGTGTACAACCTAATGGAGAGTTCAAACATCTTTCAAGATATCTTAGATGGATGAGTTGGCATGGATTTCCTTTGAGACACACTCCCATAGACTGCTATCAACCAAATATAATTTCCATTGAGTTAGAAAACAGCAAACTCAAAGTTCTGTGGAAGGAGTCCCGGTTGTTGAAACAGCTGAAGATTTTAAATCTTAGTCATTCACATGACTTGATCAAAACCCCAGATTTTTCATACCTACCTAATCTTGAGAAGTTAGTACTCAAGGATTGTACAGAATTGTCTTTGATTTCCTATACCATTGGAACTCTAAAAAACATCCTTCATATCAATATAGAAGGATGTACAAACCTTTGTGTACTTCCAAGAAGCATATACAAGTTGACATCTCTTGAAACTCTCATCCTCTCTGGGTGTTTAAAGATTGATAAGTTAGAAGAAGATGTGGAACAAATGGAATCTTTGGCAGTGCTAAAAGCTGATAACACTGCCATAGCACAAGTGCCCAGTGCGCTAGCAAGATTAAGAAACCTTGGACATGTTTCTTTGTGTGGCTATGAAGGATTGGCATGTGATGTGATTCCTTTAATTATGTTTTGGTTATGGACTTCACCAAATAATATGTTGTCTTCAGTTATGCAAAAATGTTCAAATGTTTTCACTTATGCAAATTGGCGTCCACGGCTTCAGATAAAAGGATATGTATCTTTGAAAACTGATAATGTGGCAAATTGCAATGAATTGGGGATGGATATTTCTGAACCAAAATCTTCTTTGAATTCCCTTTTGATTCAAATGGGGGTGGAAAACTCAACCACAGACATACTTCAAAAGACTATTTTACAGAACAATGAGCTTGGAGATTACCTGCTCCCTTATGACAACAATTATCCTGGTTTGTTAACATTCAGTGGTGAAGGTTCCTTTGTGACTTTTCAAGTCCTTCATATGAATGGGCGCAACTTGAAGTCCATGATGTTGCACATTGTTTACTATTCTACTTCTTCCACATTCACTACAACAGAAGATCTGATTCTTGAAAATGTGCAAATCTTAAATCTCTCAAGGGACATGTCCAATGTATTTAAGGGAGATAAGTTAGTTTCATTCAAAGATGAGGACAGGGAAATCCTAATGTCAAGTCTAGAACCTGGTGACACCGTGCGGATTGTTGTTGCTTTAGGATCTGGGTTCATTGTGACGAAGACCATAGTTTATCTCATATATGACGATGAACCACCAATTGAGGAAAACTTGGAGCACTTCAATGATGATGAGGATGATATTGTTTGTTCTACTGGTGATGACGTTGTAGCTTCTGTGAATGAAGGCACTTTGGGTGTTGATGTCATTGCAGCAGATTATGATGAAGATGTTACTGTTTTTGGTGTTCATGATGCAGTAGCTGGTATGAATGAAATTGTTTCTGGTGTTGATGCTATGGCAAAAGATGAGGATGGTGCTACTGTTGCTAATGTTGATGATGATATGGTAGCCAATCTGGATAGAAATGCTTCTACTTCTGGTACTGATATCATGCCACCAATTACTAATGGTTTTGGTGCTAATTATGTAGTAGCAACTGATATAAATGAAAGTTCTTCGAGTGTTGATGATAATAATGATGATGATGTTGCTGCCATTGGAGATAAAATGACAGGACTTATTCCCTTAGTTCAGGTCCCTCTTGATGCTAATACATATTCTGAGCTTACATTGACTATGATGGTTTCAAAAGATGAGCTTCATGAAGATAGTGATTTGCTTATTGCAGAGTTGGATAAAACATTGTCAGAGAGCTACTTTCTGTACCCTAGTCCTGGATCATTAGAACTTCAAAGTCTCTCTGTGATTTCAATCTTTCAAAAAATGCAACTTCTTTTGGATAATGAACTAGAAGCCTTGGTAGGAGATGTTAACATCAAGAATCAGCTTCTTGGCTATGTGGCTCAATTAGGCCAAATAATAGGGTCATCACAAGTTCCTAAAGATCTTCACTCTTTGGTTACTGAGATTAATCACTTCTATGAAGATTTTCTCAATGATTTTCCGCCTGTTCAAGAAGTGTTAGACAATCATGAAAGATTGATTGACTCACAGAATGGACTTCAAGAGAAGTTAAAAGCGGCTAAGGCTAAACAGGGACACTTTTCTGCTTCAATTTCTAAAGGAAAAGAAAGGGTCAATGAGATGTCTAAAGAAATCAATGAATTGGAGGTGAAACTAAAAGCCTTGCATGAGAAGAGGAATAGGTTACAATTCAATGTGAAATGTTGTGAGTTTGAATCTATAAACATCAATAAGAATTTGGAAACTTTGATAAAAGAGAATGAAGAGGTTGTGAGCACTCTCAAAGAATCAGAATCTGCATTGAGAAAGGCTGAGTTGTCAAAGCAGAGTTATGAGAGGAAGCTAGCAGTCTTGAAGCAAGCTCTTTATGGCAACACTAGACATTAG 5664 0.3872 MSYYQSAERIPDPSWKYDVYLSFRGQDTRHGFTSHLYDALRRAGIHVFRDEVALGRGEQITYTLIQAIEASRLLVVVFSESYAGSRWCLDELMKIMECISTGGQTVIPVFYNVDPADVRHQRGPFGEAFQSHRFSYENEIVHAWRAALTEAANLSGFAITGDRNEAEMIGKIVKHITTLLASEDLFIAKHLVGVQSRTEDVIQELHSHKPEDVVLMGIWGMGGVGKTTIAKSVYNQIRHGFDRPMFLPNIREMWENNQQVFLQEQLLNGICKAQINIQNIASGVALLREKLRLKKVFLVLDDVNNIDQLNALCGSPEWFGAGSIIIITTRDRGLLRRIGVEYVYQVKEMDYNESLQLFCWNAFGKATPLTEFARLAEDVVKYCGGLPLALITIGCQLFGKMKDEWENVLGGLKRFPHPDVHKVLKISFDGLNDDREKEIFLDIASFCIGMEREEALQTLKDAFGLSEYGIGFLEEQSLITFDEKDRVRMHPLLRDMGREIVREQSQTDAQRRMYDVFVSFRGKDTRPTFTSHLHTSLQNAGITAYKDDDDVDGLQRGERISIALLKAIGLSACSVIVFSTHYSDSKWCLQELENIMVCHRTKGQVVYPIFYEVDPSDVRYQKKETDFGKAFESLISRRSVEEDKVQSWRTDLREVSSFSGTTVINSRNESEDIKRIVEHVTRLLDKTELFVAAHPVGVEPRVQKLIEESNIQKIKDVLILGIKGMGGVGKTTIAKAIYNKIRRDFDGRSFLLNIRETWQQDNGKVLLQQQLLEDIFIATRIHISNIDSGKQILKERLGAKRVLIVLDDVTDLDQLNALCGSGEWCRPGSVVIITTRHDDLLRVCKLTFNLEEMNGAESLELFSWHVFKQACPKDKFVKLSTDVVEYSNGLPLALEVLGSHLFNMGIIEWQSALDTLKLIPHDKVQKKLQISFDGLSKNYEKEIFLDIACFFIGMDRNDVVKILNGCGLHAEIGISALKARNLVTVDNNMLGMHDLLRDMGRAIICEQSPELEERSRLWYDEKVLELLENHEGTDLKAKGLSLKLPMTNSICLSKEAFKNMTKLKLLQLAGVQPNGEFKHLSRYLRWMSWHGFPLRHTPIDCYQPNIISIELENSKLKVLWKESRLLKQLKILNLSHSHDLIKTPDFSYLPNLEKLVLKDCTELSLISYTIGTLKNILHINIEGCTNLCVLPRSIYKLTSLETLILSGCLKIDKLEEDVEQMESLAVLKADNTAIAQVPSALARLRNLGHVSLCGYEGLACDVIPLIMFWLWTSPNNMLSSVMQKCSNVFTYANWRPRLQIKGYVSLKTDNVANCNELGMDISEPKSSLNSLLIQMGVENSTTDILQKTILQNNELGDYLLPYDNNYPGLLTFSGEGSFVTFQVLHMNGRNLKSMMLHIVYYSTSSTFTTTEDLILENVQILNLSRDMSNVFKGDKLVSFKDEDREILMSSLEPGDTVRIVVALGSGFIVTKTIVYLIYDDEPPIEENLEHFNDDEDDIVCSTGDDVVASVNEGTLGVDVIAADYDEDVTVFGVHDAVAGMNEIVSGVDAMAKDEDGATVANVDDDMVANLDRNASTSGTDIMPPITNGFGANYVVATDINESSSSVDDNNDDDVAAIGDKMTGLIPLVQVPLDANTYSELTLTMMVSKDELHEDSDLLIAELDKTLSESYFLYPSPGSLELQSLSVISIFQKMQLLLDNELEALVGDVNIKNQLLGYVAQLGQIIGSSQVPKDLHSLVTEINHFYEDFLNDFPPVQEVLDNHERLIDSQNGLQEKLKAAKAKQGHFSASISKGKERVNEMSKEINELEVKLKALHEKRNRLQFNVKCCEFESININKNLETLIKENEEVVSTLKESESALRKAELSKQSYERKLAVLKQALYGNTRH 1887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02202 1887 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 27 509 - -
Aip02g02202 1887 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 509 IPR044974 GO:0006952
Aip02g02202 1887 SMART AAA_5 716 852 IPR003593 -
Aip02g02202 1887 SMART AAA_5 212 350 IPR003593 -
Aip02g02202 1887 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 157 IPR035897 -
Aip02g02202 1887 Gene3D - 349 432 IPR042197 -
Aip02g02202 1887 Gene3D - 853 936 IPR042197 -
Aip02g02202 1887 SUPERFAMILY "Winged helix" DNA-binding domain 419 506 IPR036390 -
Aip02g02202 1887 ProSiteProfiles TIR domain profile. 512 684 IPR000157 GO:0007165
Aip02g02202 1887 Coils Coil 1762 1782 - -
Aip02g02202 1887 Gene3D - 682 849 IPR027417 -
Aip02g02202 1887 Gene3D - 179 342 IPR027417 -
Aip02g02202 1887 Coils Coil 1836 1880 - -
Aip02g02202 1887 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 524 1478 IPR044974 GO:0006952
Aip02g02202 1887 SUPERFAMILY "Winged helix" DNA-binding domain 922 1028 IPR036390 -
Aip02g02202 1887 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 524 1478 - -
Aip02g02202 1887 Coils Coil 1211 1231 - -
Aip02g02202 1887 Gene3D - 13 178 IPR035897 -
Aip02g02202 1887 Gene3D - 511 681 IPR035897 -
Aip02g02202 1887 PRINTS Disease resistance protein signature 887 901 - -
Aip02g02202 1887 PRINTS Disease resistance protein signature 796 810 - -
Aip02g02202 1887 PRINTS Disease resistance protein signature 1124 1140 - -
Aip02g02202 1887 PRINTS Disease resistance protein signature 719 734 - -
Aip02g02202 1887 SUPERFAMILY L domain-like 1042 1424 - -
Aip02g02202 1887 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Aip02g02202 1887 Pfam TIR domain 16 178 IPR000157 GO:0007165
Aip02g02202 1887 Pfam TIR domain 514 682 IPR000157 GO:0007165
Aip02g02202 1887 Gene3D Ribonuclease Inhibitor 1005 1291 IPR032675 -
Aip02g02202 1887 Pfam NB-ARC domain 703 919 IPR002182 GO:0043531
Aip02g02202 1887 Pfam NB-ARC domain 197 416 IPR002182 GO:0043531
Aip02g02202 1887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 443 IPR027417 -
Aip02g02202 1887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 682 947 IPR027417 -
Aip02g02202 1887 Coils Coil 1790 1824 - -
Aip02g02202 1887 SUPERFAMILY Toll/Interleukin receptor TIR domain 507 660 IPR035897 -
Aip02g02202 1887 SMART till_3 16 154 IPR000157 GO:0007165
Aip02g02202 1887 SMART till_3 513 658 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02202 Aip-Chr2 92867027 92880234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02202 14 505 WRKY Transcription Factor Family AT4G12020 28.226 4.67e-46 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02202 - - ahf:112749664 2613.18