Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02197 ATGGGTGTGCGCTTTTTTGGCAAGAAGATCGGCACAACAATTTCTCTCTCAGTATATGTGGGAGATCGTCACATCCCCTGGCTGAGCAAGCCACAACTTGGTGGCGCGAATGAGCGAAGAACCCGCTACCCTCCCCAGCGAGTTACTCTGGATGAAGTTGAAGGAGTTTACCCAACGAATCCCTTTGCTCTTCATTCTAATCCATCATCGCCCATGTCTTACTACCAATCAGCAGAAAGAATCCCCGATCCATCATGGAAGTACGATGTGTTTTTCAGTTTCCGAGGCCAAGACACTCGCCACGGATTCACCTCACATCTCTATGACGCTTTGAGGAGAGCTGGGATTTATGTTTTCATTGACGATGAGGTGGTGCTTGGGAGAGGAGACCAGATGACATACACACTGATTCAAGCAATCGAAGCTTCTAGACTTTTTGTTGTTATTTTGACAGAAAGTTATGCTGGTTCTAGATGGTGTCTGGACGAGTTGATGAAAATAATGGAGTGTAGAAGCACTATAGGTCAAACTGTCATTCCGGTATTCTACAATGTTGATCCCGAAGATGTACGCCACCAGAGTGGTCCTTTTGAAGAAGCTTTTCAAAGTCATAGATTCTCATATGAGAATGAGATAGTCCACGCATGGAGGGCTGCGCTCACTGAAGCTGCTAAACTTCCTGGATTTCTAATCACTAGAAACAGTAATGAAGTTGAAATTATCGGAGAGATTGTTGAACATATAACTACTCTACTTGCTTCGGAAGACTTGTTCATCGCAAGGCATCCAGTGGCAGTGCAATCTCGCACGGAAGATGTGATTCAACAGTTACATTCGCATAAACCAGAAGATGTCGTGTTAATGGGGATATGGGGGATGGGAGGAGTGGGTAAAACAACTATTGCGAAAAGTGTTTATAATCAAATTCGTCACGATTTTGATAGGCCAATGTTCCTCCCAAACATTCAGGAGATGTGGGAGAATAACCAACAGGTTTTTCTGCAAGAACAGTTATTGAATGGTATTTGCAAAGCACAGATAAACATACAAAACATCGCATCAGGAGTAGCTTTATTAAGGGAAAAACTTCGCCTGGAAAGCGTATTTCTTGTACTTGATGATGTAAATAATATAGACCAGTTGAATGCCTTGTGCGGTAGTCGAGAATGGTTTGGTGCAGGGAGTATAATAATCATCACAACAAGAGATAGAAATCTGCTTCATATGATTGGAGTTGATTATGTGTACCAAATGACAGAAATGAATTACGATGAAGCTCTTGAACTTTTTTGTTGGAATGCATTTGGGAAAGCAACTCCTTTAACAGAGTTTGCTAGACTTGCAGATGATGTAGTTAAATATTGTGGGGGATTGCCATTGACCCTTAAACTAAGTGGTAGTCAATTGTTTGGAAAGATGAAAGACgagtgggagaatgtattaggtcgactgaaagggtcttcccctaaggatatattagatgttttgagactaagctttgatgccttagatgatgacaaacagaaagaaatatttcttgacatagcTAGCTTTTGTATTGGCATGGAAAGGGAGGAGGTACTGAAAACACTAAATTATGGCTTTGGAATTAGAGAACATGGAATTAGTTTCCTTGAAGAGCGGAATTTTATAAAATTTGATGAGAAAGACAGAGTTCAAATGCATCCTTTGCTGCGAGAGATGGGAAGAAATATCGTTCGAGAGCAATCACAAACTGATGCTCCGCgaaggatttacgatgttttcgtgagttttcgaggcaaggacactcgtacaacgtttacatcacatctccatacatctctccaaaatgctggaattgctgctttcaaggatgatgatgatgttgatggacttcaaaggggagaacggatttcaattgcattgttaaaagcaattggattgtctgcatgttctgtcgttgttttctcaacccactatgctgattcaaaatggtgcctgcaagagcttgagaatatcatggtatgccatagaacaaaaggtcaagtggtttaccctatattctatgaagtagatccctcagatgtACGTTATCAAAAGAAAGAGAGTGACTTTGGGAAAGCTTTTGAAAGTCTTATAAGTCGAAGATCAGTTGAAGAAGATAAGGTGCAAAGTTGGAGAACAGATCTTCGTGAAGTTAGTAGCTTTTCAGGGACGACTGTGATCAACTCCAGGAATGAAAGTGAAGATATCAAAAGAATTGTTGAACACGTTACTCGTTTATTAGATAAGACAGAGTTGTTCGTTGCAGCACATCCAGTGGGAGTAGAACCTCGTGTGCAAAAGTTGATTGAAGAATCAAACATTCAAAAGACAAAAGATGTTCTGATACTTGGGATAAAAGGCATGGGGGGCGTTGGTAAAACGACTATTGCCAAAGCCATCTATAACAAAATTGGTCGCGATTTTGATGGCAGGAGCTTCCTCCTTAACATTAGAGAAACATGGCAGCAAGATAATGGAAAGGTTCTCTTGCAACAGCAACTTCTTGAGGATATATTCATTGCAACAAGGATACACATACGTAACATTGATTCAGGGATGCAAATGTTAAAGGAAAGGCTTGGTGCTAAAAGGGTACTCATTGTGCTTGATGATGTGACTGATTTGGACCAACTCAATGCTTTGTGTGGTAGTGGTGAATGGTGTTGTCCTGGGAGTGTAGTAATCATCACAACAAGACATGATGATCTTCTTCGAGTGTGTAAACTCACATTCAATCTAGAAGAGATGAATGGGGCTGAATCCCTTGAGCTTTTTAGCTGGCATGCATTCAAACAAGCATGTCCAAAAGAAGAGTTTGTCAAGCTATCTAAAGATGTAGTTGAATATTCTAATGGATTGCCACTGGCTCTGGAAGTTCTTGGGTCCCATTTGTTTAATATGGGAATAAAAGAGTGGCAAAGTGCATTGAATACTCTGAAATCAATTCCCCCTGATAAAGTCCAGAAGAAACTACAAATAAGTTTTGATGGTTTAAGTAAGAATTATGAAAAGGAAATATTCCTTGACATTGCATGCTTTTTTATTGGGATGGATCGAAATGATGTTGTGAAGATATTAAATGGTTGTGGACTCCATGCAGAAATTGGAATCAGTGCCCTCAAAGAGCGAAACCTTGTAACTGTTGATAACAATAATATGCTTGGAATGCATGACTTGTTAAGAGATATGGGAAGAGCAATAATTTGTGAGCAAACACCTGAACTTGAAGAGCGAAGTAGATTATGGTACGATGTTTTTGTGAGCTTTCGAGGCAAGGACACTCGTCCAACGTTTACATCGCATCTCCATACATCTCTCCAAAATGCTGGAATTACTGCTTTCAAGGATGATGATGATGTTGATGGACTTCAAAGGGGAGAACGGATTTCAATCGCATTGTTAAAAGCAATTGGATTGTCTGCATGTTCTGTCATTGTTTTTTCAACCCACTATGCTGATTCAAAATGGTGCCTGCAAGAGCTTGAGAATATCATGGTATGCCATAGAACAAAAGGTCAAGTGGTTTACCCCATATTCTATGAAGTAGATCCCTCAGACGTACGTTATCAAAAGAAAGAGAGCGAGTTTGGGAAAGCTTTTGAAAGTCTTATAAGTCGGAGATCAGTGGAAGAAGATAAGGTGCAAAGTTGGAGAACAGATCTTCGTGAAGTTAGTAGCTTTTCAGGGACGACTGTGATCAACTCCAGGAACGAAAGTGAAGATATCAAAAGAATTGTCGAACACGTTACTCGTTTATTAGATAAGACAGAACACACTCCCATAGACTGCTATCAACCAAATATAATTTCCATTGAGTTAGAAAACAGCAAACTCAAAGTTCTGTGGAAGGAGTCCCGGTTGTTGAAACAGCTGAAGATTTTAAATCTTAGTCATTCACATGACTTGATCAAAACCCCAGATTTTTCATACCTACCTAATCTTGAGAAGTTACTAGTCAAGGATTGTACAGAATTGTCTTTGATTTCCTATACCATTGGAACTCTAAAAAACATCCTTCATATCAATATAGAAGGTTGTACAAACCTTTGTGTACTTCCAAGAAGCATATACAAGTTGACATCTCTTGAAACTCTCATCCTCTCTGGGTGTTTAAAGATTGATAAGTTAGAAGAAGATGTGGAACAAATGGAATCTTTGGCAATGCTAAAAGCTGATAACACTGCCATAGCACAAGTGCCCAGTGCGCTAGCAAGATTAAGAAACCTTGGACATGTTTCTGTGTGTGGCTATGAAGGATTGGCATGTGATGTGATTCCTTTAATTATGTTTTGGTTATGGACTTCACCAAATAATATGTTGTCTTCAGTTATGCAAAAATGTTCAAATGTTTTCACTTATGCAAATTGGCGTCCACGGCTTCAGATAAAAGGAGATGTATCTTTGAATACTGATAATGTGGCAAATTGCAATGAATTGGGGATGGATATTTCTGAACCAAAATTTTCTTTGAATTCCCTTTTGATTCAAATGGGGGTGGAAAACTCAACCACAGAGATACTTCAACAGACTATTTTACAGAACAATGAGCTTGGAGATTACCTGCTCCCTTATGACAACAATAATCCTGGTTTGTTAACATTCAGTGGTGAAGGTTCCTTTGTGACTTTTCAAGTCCTTCATATGGATGGGCGCAACTTGAAGTCCATGATGTTGCACATTGTTTACTATTCTACTTCTTCCACATTCGCTACAACAGGTCTGATTCTTGAAAATGTGCAAATCCTAAATCTCTCAAGGGACATGTCCAATGTATTTAAGGGAGATAAGTTAGCTTCATTCAAAGATGAGGACAGGGAAATCCTAATGTCAAGTCTAGAACCTGGTGACACCATGCGGATTGTTGTTGCTTTAGGATCTGGGTTCATTGTGAAGAAGACCATAGTTTATCTCATATATGACGATGAACCACCAATTGAGGAAAACTTGGAGCACTTCAATGATGATGAGGATGATACTGTTTGTTCTACTGGTGATGACGTTGTAGCTTTTGTAAATGAAGGCACTTTGGGTGTTGATGTCATTGCAGCAGATGATGATGAAGATGTTACTGTTTTTGGTGTTCATGATGCAGTAGCTGGTATGAATGAAATTGTTTCTGGTGTTGATGCTATGGCAGAAGATAAGGATGGTGTTACTGTTGCAAATGTTGATGATGATACGGTAGCCAATCTGGATAGAAATGCTTCTACTTCTGGTACTGATATCATGCCACCAATTACTAATGGTTTTGGTGCTAATTATGTAGTAGGAACTGATATAAATGAAAGTTCTTCAAATGTTGATGATAATAATGATGATGATGTTGCTGCCATTGGAGATAAAAATGTAAGTGATAATCTCTATGTTGCTTCCGTGGTAAAAAGACAGCAAGTTGAAGACATTTCAACCACCAAGACATCCGAGTCAAAGTCGACAGGACTTATTCCCTTAGTTCAGGTCCCTCTTGATGCTAATACATCTTCTGAGCTTACATTAACCATGATGGTTTCAGAAGAAGATGAGCTTGATGAAGATAGTGATTTGCTTATTGCAGAGTTGGATAAAACATTGTCAGAGAGCTACTTTCTGTACCCGAGTCCTGGTTCATTAGAACTTCAAAGTCTCTCTGTAATTTCAATCTTCCAAAAAATGCAACTTCTTTTGGATAATGAACTAGAAGCCTTGGTAGGAGATGTTAACATCAAGAATCAGCTTCTTGGCTATGTGGCTCAATTAGGCCAAATAATAGAGTCATCACAAGTTCCTAAAGATCTTCACTCTTTGGTTACTGAGATTAGTCACTTCTATGAAGATTTTCTCAATGATTTTCCACCTGTTCAAGAAGTGTTAGACAATCATCAAAGATTGATCGACTCAAAGAATGGACTTCAAGAGAAGTTAAAAGCGGCTAAGGCCAAACAGGGACACTTTTCTGCTTCAATTTCTAAAGGAAAAGAAAGGGTCCATGAGATGTCAAAAGAAATCAATGAATTGGAGGTGAAACTAAAAGTCTTGCATGAGAAGAGGAATAGGTTACAATTCAATGTGAAATGTTGTGAGTTTGAATCTATAAACATCAATAAGAATTTGGAAATTTTGATAAAAGAGAATGAAGAGGTTGTGAGCACTCTCAAAGAATCAGAATCTGCATTCAGAAAGGCTGAGTTGTCAAAGCAGAGTTATGAGAGGAAGCTAGCAGTCTTGAAGCAAGCTCTTTATGGCAACACTAGACATTAG 6264 0.3629 MGVRFFGKKIGTTISLSVYVGDRHIPWLSKPQLGGANERRTRYPPQRVTLDEVEGVYPTNPFALHSNPSSPMSYYQSAERIPDPSWKYDVFFSFRGQDTRHGFTSHLYDALRRAGIYVFIDDEVVLGRGDQMTYTLIQAIEASRLFVVILTESYAGSRWCLDELMKIMECRSTIGQTVIPVFYNVDPEDVRHQSGPFEEAFQSHRFSYENEIVHAWRAALTEAAKLPGFLITRNSNEVEIIGEIVEHITTLLASEDLFIARHPVAVQSRTEDVIQQLHSHKPEDVVLMGIWGMGGVGKTTIAKSVYNQIRHDFDRPMFLPNIQEMWENNQQVFLQEQLLNGICKAQINIQNIASGVALLREKLRLESVFLVLDDVNNIDQLNALCGSREWFGAGSIIIITTRDRNLLHMIGVDYVYQMTEMNYDEALELFCWNAFGKATPLTEFARLADDVVKYCGGLPLTLKLSGSQLFGKMKDEWENVLGRLKGSSPKDILDVLRLSFDALDDDKQKEIFLDIASFCIGMEREEVLKTLNYGFGIREHGISFLEERNFIKFDEKDRVQMHPLLREMGRNIVREQSQTDAPRRIYDVFVSFRGKDTRTTFTSHLHTSLQNAGIAAFKDDDDVDGLQRGERISIALLKAIGLSACSVVVFSTHYADSKWCLQELENIMVCHRTKGQVVYPIFYEVDPSDVRYQKKESDFGKAFESLISRRSVEEDKVQSWRTDLREVSSFSGTTVINSRNESEDIKRIVEHVTRLLDKTELFVAAHPVGVEPRVQKLIEESNIQKTKDVLILGIKGMGGVGKTTIAKAIYNKIGRDFDGRSFLLNIRETWQQDNGKVLLQQQLLEDIFIATRIHIRNIDSGMQMLKERLGAKRVLIVLDDVTDLDQLNALCGSGEWCCPGSVVIITTRHDDLLRVCKLTFNLEEMNGAESLELFSWHAFKQACPKEEFVKLSKDVVEYSNGLPLALEVLGSHLFNMGIKEWQSALNTLKSIPPDKVQKKLQISFDGLSKNYEKEIFLDIACFFIGMDRNDVVKILNGCGLHAEIGISALKERNLVTVDNNNMLGMHDLLRDMGRAIICEQTPELEERSRLWYDVFVSFRGKDTRPTFTSHLHTSLQNAGITAFKDDDDVDGLQRGERISIALLKAIGLSACSVIVFSTHYADSKWCLQELENIMVCHRTKGQVVYPIFYEVDPSDVRYQKKESEFGKAFESLISRRSVEEDKVQSWRTDLREVSSFSGTTVINSRNESEDIKRIVEHVTRLLDKTEHTPIDCYQPNIISIELENSKLKVLWKESRLLKQLKILNLSHSHDLIKTPDFSYLPNLEKLLVKDCTELSLISYTIGTLKNILHINIEGCTNLCVLPRSIYKLTSLETLILSGCLKIDKLEEDVEQMESLAMLKADNTAIAQVPSALARLRNLGHVSVCGYEGLACDVIPLIMFWLWTSPNNMLSSVMQKCSNVFTYANWRPRLQIKGDVSLNTDNVANCNELGMDISEPKFSLNSLLIQMGVENSTTEILQQTILQNNELGDYLLPYDNNNPGLLTFSGEGSFVTFQVLHMDGRNLKSMMLHIVYYSTSSTFATTGLILENVQILNLSRDMSNVFKGDKLASFKDEDREILMSSLEPGDTMRIVVALGSGFIVKKTIVYLIYDDEPPIEENLEHFNDDEDDTVCSTGDDVVAFVNEGTLGVDVIAADDDEDVTVFGVHDAVAGMNEIVSGVDAMAEDKDGVTVANVDDDTVANLDRNASTSGTDIMPPITNGFGANYVVGTDINESSSNVDDNNDDDVAAIGDKNVSDNLYVASVVKRQQVEDISTTKTSESKSTGLIPLVQVPLDANTSSELTLTMMVSEEDELDEDSDLLIAELDKTLSESYFLYPSPGSLELQSLSVISIFQKMQLLLDNELEALVGDVNIKNQLLGYVAQLGQIIESSQVPKDLHSLVTEISHFYEDFLNDFPPVQEVLDNHQRLIDSKNGLQEKLKAAKAKQGHFSASISKGKERVHEMSKEINELEVKLKVLHEKRNRLQFNVKCCEFESININKNLEILIKENEEVVSTLKESESAFRKAELSKQSYERKLAVLKQALYGNTRH 2087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02197 2087 Gene3D - 257 414 IPR027417 -
Aip02g02197 2087 Gene3D - 729 921 IPR027417 -
Aip02g02197 2087 SUPERFAMILY Toll/Interleukin receptor TIR domain 79 229 IPR035897 -
Aip02g02197 2087 Pfam NB-ARC domain 269 486 IPR002182 GO:0043531
Aip02g02197 2087 Pfam NB-ARC domain 775 994 IPR002182 GO:0043531
Aip02g02197 2087 Coils Coil 2036 2080 - -
Aip02g02197 2087 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1104 1261 - -
Aip02g02197 2087 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 595 1092 - -
Aip02g02197 2087 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1104 1261 IPR044974 GO:0006952
Aip02g02197 2087 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 595 1092 IPR044974 GO:0006952
Aip02g02197 2087 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1266 1648 IPR044974 GO:0006952
Aip02g02197 2087 Gene3D - 925 1008 IPR042197 -
Aip02g02197 2087 Gene3D - 421 504 IPR042197 -
Aip02g02197 2087 Gene3D - 548 728 IPR035897 -
Aip02g02197 2087 Coils Coil 1382 1402 - -
Aip02g02197 2087 Pfam TIR domain 586 757 IPR000157 GO:0007165
Aip02g02197 2087 Pfam TIR domain 1092 1264 IPR000157 GO:0007165
Aip02g02197 2087 Pfam TIR domain 87 250 IPR000157 GO:0007165
Aip02g02197 2087 SUPERFAMILY Toll/Interleukin receptor TIR domain 1087 1238 IPR035897 -
Aip02g02197 2087 SUPERFAMILY Toll/Interleukin receptor TIR domain 578 732 IPR035897 -
Aip02g02197 2087 Coils Coil 1962 1982 - -
Aip02g02197 2087 ProSiteProfiles TIR domain profile. 584 756 IPR000157 GO:0007165
Aip02g02197 2087 ProSiteProfiles TIR domain profile. 1090 1262 IPR000157 GO:0007165
Aip02g02197 2087 Coils Coil 1990 2024 - -
Aip02g02197 2087 ProSiteProfiles TIR domain profile. 86 252 IPR000157 GO:0007165
Aip02g02197 2087 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1266 1648 - -
Aip02g02197 2087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 515 IPR027417 -
Aip02g02197 2087 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 754 1019 IPR027417 -
Aip02g02197 2087 SUPERFAMILY "Winged helix" DNA-binding domain 491 584 IPR036390 -
Aip02g02197 2087 PRINTS Disease resistance protein signature 868 882 - -
Aip02g02197 2087 PRINTS Disease resistance protein signature 1295 1311 - -
Aip02g02197 2087 PRINTS Disease resistance protein signature 959 973 - -
Aip02g02197 2087 PRINTS Disease resistance protein signature 791 806 - -
Aip02g02197 2087 SUPERFAMILY L domain-like 1269 1567 - -
Aip02g02197 2087 SMART till_3 585 730 IPR000157 GO:0007165
Aip02g02197 2087 SMART till_3 87 226 IPR000157 GO:0007165
Aip02g02197 2087 SMART till_3 1091 1236 IPR000157 GO:0007165
Aip02g02197 2087 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 97 580 IPR044974 GO:0006952
Aip02g02197 2087 Gene3D - 1087 1268 IPR035897 -
Aip02g02197 2087 Gene3D - 83 256 IPR035897 -
Aip02g02197 2087 SUPERFAMILY "Winged helix" DNA-binding domain 994 1081 IPR036390 -
Aip02g02197 2087 Gene3D Ribonuclease Inhibitor 1272 1430 IPR032675 -
Aip02g02197 2087 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 97 580 - -
Aip02g02197 2087 SMART AAA_5 284 422 IPR003593 -
Aip02g02197 2087 SMART AAA_5 788 924 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02197 Aip-Chr2 92697418 92788256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02197 274 587 WRKY Transcription Factor Family AT5G45050 34.277 2.18e-44 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02197 - - aip:107625711 2025.75