Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02196 ATGGCAGGCATTGGTAAAACAACCATTGCCATGGCTCTTTATAATCAAATCTGTTACAGATTCCAGAGGAGGATGTTTGTTGACAATATCAGCGAGAGATGTGAGCAGCATAGTATAGTTTCTTTACAGGAAGAGCTTTTTTCTTGTATCTGCAAAACAACAGAAGAAACAAAAGAAGAAGCAACGAAAGAAGCAAAGGAAAAAGCAACAAAAGAAACAACAGAGGAAACAACAAAAGCAGCAGTGGAAGAAGCAACAGAAGAAGCAACGGAAGAAGAAAGGGAAGAAACTACTGCAGAAAAAGCAAAGATTCATGACATTGAATCAGGAAAGCTTTTATTAAAGAAAAATCTCAGCAATAAAAAAACGCTTCTTGTTCTAGACGATGTGACTGAACGAGACCATTTAGAGGCATTGTGCGGAAGTCGCGAGTGGTTTGGTCCTGGAAGCACAATAATCATCACCACTAGGGATAGGAGTATGCTCAAGGACGCTGATGATATATATACAGTGAAAGGAATGGATTATGATGAATCTATTGAGCTATTTTGTTGGCACGCATTCAAGAATAAGGAAATTCCTGCAGAAGAGTATCGTGAACTTGCAGAATCTATAGTTGAGTACTGTGGGGGAGTACCACTTTTTCTTGAAGTAGCTGGATCCCATTTATATGGAAAGATGATAGAGGAGTGGGAGCCTGCATTGGAAGAACTTGAGGAAAATCCTCCTTATAAATTGCAGAGGTTTCGACAAGTGAGCTTTGATAGTTTAAGAGATGACTCGCTGAAGAAGATATTTCTTGATATAGTTTGTTTCTTTGTTGGTATGAACCGGAACCATGTTGTGAAAATATTGAATGGCACTGGACGTAATGGAGAAAAGGCCTTAAGTGCCCTTGAAGATAAATGTTTAGTAACTGTTGATGGCAACCAGCTTCAAATGCATACCTTGATAGAAGAAATTGGAAGAGAAATTGTTGATGAGGAATCACGTCTTACTCCCAAGCTAAGTACTTATGATGTATTCTTGAGTTTCCGAGGAAAAGATACTCGTGCAAAATTCACCTCACATCTCCATGCGGCTCTCGAAAATGCTGGATTTTATGTTTTCAAGGATGATGTTCAACTTCCAAGGGGAGAATGGATATCAATCTCACTACTGGAAGCAGTGAAAGACTCCAGAATGTCTATTATTGTGCTGTCTACAAATTATGCTGGTTCAAAATGGTGTCTGGAAGAGTTAGAGAATATAATGCAGCTTCAAAGAACCACAGCTCACGCAGTCGTGCCAATATTCTACGGTGTAGATCCCTCGGAAGTACGTCACCAAAGTGGTGTATTTGGACAAAAATTTAATGATCTTTTAAGAAGTCACCCAGTGGAGGAAGACAAGGAGAAAAGTTGGAGGACATCACTCCGTCAAGTTGGTAGCCTTTCAGGAATTGTTGTGGTAAATTCCAGGAATGAGAATGAGGATATCAAGAAGGTTGTTGAAGATGTTACTCATTTGCTTGACAAGACAGAATTGTTTGTTGCAGACTATCCGGTGGGAGTAACATCTCGTGTGCAAAATGTGATCAATCTATTGATGGAACAACAATCAAAAgatgttttacttcttgggatatgtggcatgggaggacttggtaaaacaaccattgccaaagcactttataatcaacttagtcgcaaatttgattgtaagtgcttcctactaaacatcagggaagtttgggagcaagataatggtcaagtttctttacaagatcgtctcctttctgatatttacaaaacaacaaagataccgatacgtagcactgaatcaggaaaacttgaattgaagaatcgactttgccacaaaagggtacttcttgttcttgatgatatagataaagtggagcaaatgaatgcattgtgtggaagtcatgaatggtttggttccggaagctgtataatcatcacaacaagagatgagcatctggttaaaatgcgtggcgttgaacctataatttatagattggatgaaatggatgatagtgaagctattgagctttttagttggcatgcattcaagcaagcatatccagacacaaatttttctgtccttactaaagatgtagttgcatattcttctggactgccacttgctcttgaagttcttgggtcctatttgtgtgatagggaaatcgaagtgtggaagaatgctttggagaaactaaaaaggattcccaatcataaaatacaggagaagctgagaataagttttgatagtcttagtgatgatactgagaaagagatatttcttgatatagcatgctttttcattgggatggaccgaagtgatgttattcagatattaaatgattgcggacttttcgctgaaattggaatcagtgtccttagagagcgaagccttgtaactgttgacagcacaaacaagcttggaatgcataatttgctaagggacatgggaagagaaataattcgcgaggaatcaccagatgaacctgagaagcgtagtagattatggcttcatgaggaagtccttcatgtattaacagaatacaagGGAACTACAACTATCACAGGACTGGCTTTGAAGTCACCAAGGACGAATCCAATTTCATTGAGCACAAAGGCATTTGAAGAGATGAATAAACTCAGATTGCTTCAGCTCGAAAAAGTACAACTTGATGGAGATTTCAAATATATTTCTAGAGATCTTAGATGGATGAGTTGGCATGGATTTCCTTTGAGTCACATTCCTAAAAACTGCTGTCAGAAAGGTTTAGTAGCCATTGAGTTGGAATATGGCAATCTCAAAATAGCATGGAAGCAGGCTCAGTTGTTGAATAAGCTGAAAATTCTGAATCTCAGTCATTCTCATCAATTGAGAGAAACTCCAGACTTTTCATACTTACCTAACCTTGAAAAGCTAATACTTGAAGATTGTTCGAGTTTGTCTTCGGTTTCCCATACCATTGGACATCTCAATCAACTTCTTCTGATAAATCTGAAAGATTGTAAAAGCCTTCGTAGCCTTCCGCGAAGCATCTATAAGTTAAAGTCACTCAAAACTCTCATTCTTTCTGGATGCTTAATGATTGACAAGTTGGAAGAGGACATGGAACAGATGGAATCTTTGACAACCTTGAAGGCAGAAGACACTGCTATAACACAAGTTCCAAATGCACTAGTAAGAATGAAAAATATTGGTTATATATCTTTGTGTGGCTTTGAAGGATCGGTTCGGGATGTTCTTCCATCTATCATTTGGTCATGGACCTATCCAACAAATAACGTGTCATCTCTGTTTCAAAATACTCTCCATCATCTATCATCTATGATCAGCAAACTTCCAAAGCGTAGTAGTCTTTTGTTGGAATCCGGTCTGCAACTTGAGATACCTGAAGATGTGGTCTTGAAAACCTTAGATGCTACAAATTGCAAGATAACTAATCTTGATGAAAATGCTTCCGTCGATGATATCACAGAAGATGAGAATGTGACTGTTTTGGATTCTGATGATATGGAGACTGATATGAATGAAAATGTTTCTGATTTTGAAGATATGGCAGTTGACAGAAATGCTGTTGTTTCTGATATGCTAACAGATAAAAGCATTGATATCATTTCCAATGGAGGTGAAAGTAGAATTAGCAGATTCTCCAGACTTCGTTCTCTTGTTCATGTTGTTCTAAAGGCACGACTATTTTGGTTTGGTTTTATTGCTATCCTAATTTGGATCACATGCAGTTATTCTGAAAATCAAGAATGTTCAACCTCATTTCAAGTATGTCAGCACACACCCACTTTTAAGGAAGCAGAGGTAATTCCCAATAAGCAAGTAGTGAAGTTGTTAGAGGAGGAAAGTAAAAGAAAGAGTAAACTCTCATATAGTCAAAGAGTTGTGGAGCCTCCGCCGGAAAGTAAAAACATCGAAGCATCGGCAACCATCAAGAACTCCAGGCCAAAGTCTAAAGGAGATATGCCTTTAGTTAAGACATATCCACCTGCAATTGCTTCATTGTCTAACTCTCAAGAGATGTCAGACAATTCAGAGTATGATAGCAATACTCAAAATCAAGATGAACTGCTTCAGACTCTTTTTGCTTCAAATCCTAAAGATGATGAACTTGCATTGATTGCTGATCCTACATCACTAATCACCACTCAAGAAGACAATGATTTGCTTGCAGAACTAGAACAAATCTTGTCAGAGAGCTATGTCTTGTCCGCGAATAAGGTCACTTCTGCTACTTCTGTTTCTGAACTTCAAAGTCTTCCATTGATTGCAGTCATTCAAAAAGTACAACTACTTTTGGATAATGAACTAGAAGCTTTGGTAGCAGATAATGACATTAGAAAACAGCTTCTTGACTACTTAGCTCATCTGGTTCAAATGAAGTCACAAGTCCCTACAAATATTCAGAAGTTGGTCAAGGAGATTAAGGAATTTTATGAAGGTTTTCTTGGTAACTTTCCACCTATTCAAGAAGTCTTGGACAATCATCAAAGGTTAATTGACACTAAGAATAGACTTGAGGAGGAGCTGGAAATAGCTAAGGCAAAGCAGGCTCATTTTTCGTCTTCAATTTCTAAAGGGAAAGTGAGGATCAATGAGATGTCAAAAGAGATCAATGAGTTGGAGGTGAAACTTAAAGCCTTATATGACAAGAGAGACAAATTAAAATCCACTGTGAAACTTTGTGAGGTTGAAACTATGAACATCAATAGGAAAGCTGTCACTTGGGTGAAAGAAACTGAAGAGGTTGTGAGCACTCTTAAGGCTTCAGAGTCTTCCTTCAAAAATGCTGAATCTTCAAAACATAATTATGAGAGGAAGCTAAGTGAATTGAAGCGAGCTCTTGGCAAAAATAAACATTAG 4887 0.3069 MAGIGKTTIAMALYNQICYRFQRRMFVDNISERCEQHSIVSLQEELFSCICKTTEETKEEATKEAKEKATKETTEETTKAAVEEATEEATEEEREETTAEKAKIHDIESGKLLLKKNLSNKKTLLVLDDVTERDHLEALCGSREWFGPGSTIIITTRDRSMLKDADDIYTVKGMDYDESIELFCWHAFKNKEIPAEEYRELAESIVEYCGGVPLFLEVAGSHLYGKMIEEWEPALEELEENPPYKLQRFRQVSFDSLRDDSLKKIFLDIVCFFVGMNRNHVVKILNGTGRNGEKALSALEDKCLVTVDGNQLQMHTLIEEIGREIVDEESRLTPKLSTYDVFLSFRGKDTRAKFTSHLHAALENAGFYVFKDDVQLPRGEWISISLLEAVKDSRMSIIVLSTNYAGSKWCLEELENIMQLQRTTAHAVVPIFYGVDPSEVRHQSGVFGQKFNDLLRSHPVEEDKEKSWRTSLRQVGSLSGIVVVNSRNENEDIKKVVEDVTHLLDKTELFVADYPVGVTSRVQNVINLLMEQQSKDVLLLGICGMGGLGKTTIAKALYNQLSRKFDCKCFLLNIREVWEQDNGQVSLQDRLLSDIYKTTKIPIRSTESGKLELKNRLCHKRVLLVLDDIDKVEQMNALCGSHEWFGSGSCIIITTRDEHLVKMRGVEPIIYRLDEMDDSEAIELFSWHAFKQAYPDTNFSVLTKDVVAYSSGLPLALEVLGSYLCDREIEVWKNALEKLKRIPNHKIQEKLRISFDSLSDDTEKEIFLDIACFFIGMDRSDVIQILNDCGLFAEIGISVLRERSLVTVDSTNKLGMHNLLRDMGREIIREESPDEPEKRSRLWLHEEVLHVLTEYKGTTTITGLALKSPRTNPISLSTKAFEEMNKLRLLQLEKVQLDGDFKYISRDLRWMSWHGFPLSHIPKNCCQKGLVAIELEYGNLKIAWKQAQLLNKLKILNLSHSHQLRETPDFSYLPNLEKLILEDCSSLSSVSHTIGHLNQLLLINLKDCKSLRSLPRSIYKLKSLKTLILSGCLMIDKLEEDMEQMESLTTLKAEDTAITQVPNALVRMKNIGYISLCGFEGSVRDVLPSIIWSWTYPTNNVSSLFQNTLHHLSSMISKLPKRSSLLLESGLQLEIPEDVVLKTLDATNCKITNLDENASVDDITEDENVTVLDSDDMETDMNENVSDFEDMAVDRNAVVSDMLTDKSIDIISNGGESRISRFSRLRSLVHVVLKARLFWFGFIAILIWITCSYSENQECSTSFQVCQHTPTFKEAEVIPNKQVVKLLEEESKRKSKLSYSQRVVEPPPESKNIEASATIKNSRPKSKGDMPLVKTYPPAIASLSNSQEMSDNSEYDSNTQNQDELLQTLFASNPKDDELALIADPTSLITTQEDNDLLAELEQILSESYVLSANKVTSATSVSELQSLPLIAVIQKVQLLLDNELEALVADNDIRKQLLDYLAHLVQMKSQVPTNIQKLVKEIKEFYEGFLGNFPPIQEVLDNHQRLIDTKNRLEEELEIAKAKQAHFSSSISKGKVRINEMSKEINELEVKLKALYDKRDKLKSTVKLCEVETMNINRKAVTWVKETEEVVSTLKASESSFKNAESSKHNYERKLSELKRALGKNKH 1628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02196 1628 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 347 1204 - -
Aip02g02196 1628 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 347 1204 IPR044974 GO:0006952
Aip02g02196 1628 Gene3D - 335 511 IPR035897 -
Aip02g02196 1628 SMART AAA_5 536 675 IPR003593 -
Aip02g02196 1628 Gene3D - 675 759 IPR042197 -
Aip02g02196 1628 PRINTS Disease resistance protein signature 539 554 - -
Aip02g02196 1628 PRINTS Disease resistance protein signature 616 630 - -
Aip02g02196 1628 PRINTS Disease resistance protein signature 710 724 - -
Aip02g02196 1628 PRINTS Disease resistance protein signature 948 964 - -
Aip02g02196 1628 Coils Coil 1595 1622 - -
Aip02g02196 1628 Gene3D Ribonuclease Inhibitor 846 1236 IPR032675 -
Aip02g02196 1628 Coils Coil 51 71 - -
Aip02g02196 1628 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1 332 - -
Aip02g02196 1628 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 332 IPR044974 GO:0006952
Aip02g02196 1628 SUPERFAMILY "Winged helix" DNA-binding domain 245 332 IPR036390 -
Aip02g02196 1628 MobiDBLite consensus disorder prediction 60 85 - -
Aip02g02196 1628 MobiDBLite consensus disorder prediction 1297 1332 - -
Aip02g02196 1628 Gene3D - 512 667 IPR027417 -
Aip02g02196 1628 Coils Coil 1532 1566 - -
Aip02g02196 1628 Gene3D - 1 170 IPR027417 -
Aip02g02196 1628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 770 IPR027417 -
Aip02g02196 1628 SMART till_3 338 478 IPR000157 GO:0007165
Aip02g02196 1628 SUPERFAMILY L domain-like 816 1155 - -
Aip02g02196 1628 Pfam TIR domain 339 501 IPR000157 GO:0007165
Aip02g02196 1628 ProSiteProfiles TIR domain profile. 337 504 IPR000157 GO:0007165
Aip02g02196 1628 Coils Coil 75 102 - -
Aip02g02196 1628 CDD AAA 516 675 - -
Aip02g02196 1628 MobiDBLite consensus disorder prediction 60 102 - -
Aip02g02196 1628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 269 IPR027417 -
Aip02g02196 1628 Pfam NB-ARC domain 520 745 IPR002182 GO:0043531
Aip02g02196 1628 Pfam NB-ARC domain 1 242 IPR002182 GO:0043531
Aip02g02196 1628 SUPERFAMILY Toll/Interleukin receptor TIR domain 337 480 IPR035897 -
Aip02g02196 1628 Coils Coil 1497 1524 - -
Aip02g02196 1628 Gene3D - 173 264 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02196 Aip-Chr2 92544190 92552810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02196 84 334 WRKY Transcription Factor Family AT4G12020 31.102 2.05e-23 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02196 - - adu:107475200 3016.87