Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02192 ATGCCTTCAAAATCCACCACCACCACAAGTAGTTCATCATCAGAGCgaagatggatctacgatgtgttcttgagtttcagaggaaccgacactcgcactatcttcatttctcatctctacaactccctcacaaacgcaggaatctacgttttcaaggacaacgaggagcttcgcaaaggaggccaggtttcatcgttactcatgcaagcaatccaagtttctagaatctccatcgttgttttctcaaagaactacgcgaactccaagagttgtctgaaagagctgcagagaattatggattgtcgaagaagcataggccaagttgtttttcctgttttctacaacgtagaaccctctcatgtgCGTCATCAGAGAGGTGCCTTTGGAAGAAGCTTTCAGGATCTTAAGAAAACAATTTCAAAGAACAAAGCTCAACTTTGGGGTACTGCGCTTCGTGATGCTGCTAGTTTGACCGGATTTCATCTCAATAATTCCAGGAATGAAAGTGAAGATATCAATAAAATCATTGAAACTATCACTGATTCGCTGGACAATACAGTCTTGTTTGTTGCACAACATCCAGTTGGAGTACAACCTCGTGCTCAACATGTGATTAAACTATTGAACTACCAAGAATCAAAAGATGTCATGCTATTGGGGATCTTGGGAATCGGAGGGATTGGGAAAACAACCATTGCCAAAGCCATTTACAATCAGATTCACCCCCATTTTGAGTCTTATTGCTTTCTTTCAAACATCAGAGAATTCTGGGAGCAGAGTACTACCAGTCAAGTGTATTTACAAGAAAGGCTTCTTTCTGATATTTATAAAACAACAAAGATCAAAATACATAACATTGAATCAGGCATATTCATTTTGCAACAAaggcttcgtcataaacaagcactcctcatactcgatgatgttgataagatagagcaactaaaagccttgtgtggaagccgcgaatggttcggtcctggaagtagaataatcatcacaacaagagatgaacatttactcaaactgctccaggttgatcacatatctagaatgccggaaatggatcaagacgaatctattcaacatttcagttggcatgcattcaaacaaccatgtcctagagaagatttcgatcaactttctagaaatgtggttgcatattgtggaggactacctttagctcttgaggttattgggtcatttttgtttgataagaaagtaagagaatgggaaagtgtggtggataagctgaaaagaattcccaatgatcaagtacagagaaagttgagaataagctttgatagtttgaatgatgatacagagaaagaaatatttcttgacattgcgtttttctttattgggatggaccgaaatgatgtagtacatattttagatgaatatgatgctgcgattggaatcagtgttcttgtagatcgaagccttgtcaccattgacaataataacaagcttggaatgcatgatttgctacgagatatggggagagaaattgttcgcgagaaatcaccaaaggagccagaggaacgtagcagattatggttgcaaaaagatgtgtaccatgtattgTCAAATCATATGGGGACAAAAGCTATCGAGGGATTGACTTTAAAGTTGACCAATTCGGTTAGTTTGGAGGCAAAAATGTTTAAGATGATGAAGAGACTTAGATTACTTCAACTTGCTGGTGTGCAACTAGATGGAAATTTTGAGGATCTTCCGAAACATCTAAGATGGCTTCATTGGCATGAATGCTATTTGAAGTACATACCTTCCAACTTTGATCAAGCAAGTTTAGTTGCCATTGAATTAGAATTCAGCAATCTCAAGTTTGTGTGGAAAGAGGCCAAGTTCATGGAGAAGTTGAAAGTTCTAAATCTTAATCACTCTTATAACTTGACACAAACACCTGACTTTTCATACTTGCCAAATCTTGAAAAGCTGCTACTCAAAGATTGTTCAAGCTTATCTACAATTTCAGACACAATAGGACATCTGAAAAAGATTCTTGTAATAAATTTAGAAGACTGCACAAGCCTTGGCAACCTGCCAAGAAGCTTTTACAAGTTGAAATCTCTGACCACTCTCATCATTTCCGGATGCTCAATGATTGACAAATTGGAAGAGGACTTAGAACAAATGGAGTCATTAATAACTTTGATTGCAGACAAGACTGCAATAACACAAGTGCCATTTTCAATAGTAAGATCAAAAAGCATTGGATATGTTTCTTTGTGTGGTTATGAAGGATTCTCACGTGATGTGTTTCCTTCTCTCATTTGGTCATGGATGTCACCAACAAGTAAATATAACCTCTCATCCATGGTTCAAGCATCTTCTTCAGCACTTATTCCATTAGATTTACCAAAGCTTAGGAGTCTCTGGGTGAAGTGTGAATCTGATCTTCAATTAAATGGAGGTGTAGCAAGAATTTTGGCTACCTTGTTTGCCACATACAACAAGGAACTAGAAGCAACACCAACTACGTCACTAGTCATGGAGAATATCAAAGGTTCAGAAATATTTGATTTGAGCAATCAATCTCACAATTCTGAATCACTCAAGTGCCTTATAATTGAAGTTGGAATGAAGAGTCATGCCACCAACGCCCTTAAGGACAAAATTTTACAGGGTTTGATGACAACAACCAATGAGTTTAGTGACAAGTATTGGTTAACATTCGGTTCCAAAGGTTCTTCTGTGGTATTCGAAGTCCCTCAAATGAATGGGTGCAACTTGAAGGCAGTGACATTGCGTATTCTTTATTCTTCTTCCTCAGAAACCATCTTATCAGAATGTCTTAAAAACGTGTTAATCATAAATTACACAAAGTCCACCATTCAAGTCTATAAACAAGACACACTAGCCTCTCTTGAAGATGAGGAGGGAAAAACCATAACTTCACATATAGAACCCGGTAATAAAGTGGAGATTCTTCTTGTTGGTTACAAATTCATTGTGAAGAGAACAACAGTTTATCTGATATATGATGAACCGGTTGACCACTATGCGGAGCACTATCATGCGGATGTTATTGTTTCAAGTGATAATTACATTATTTCTAGTGATAATAATGATATGGAAAGTGATGAATGTTCTAGTGTTTCTGGTGGTGGTCATGATAGGTCAAAGAAGAAATATTCATGTTTCTATTGGTGTTGGAGATAA 3186 0.2527 MPSKSTTTTSSSSSERRWIYDVFLSFRGTDTRTIFISHLYNSLTNAGIYVFKDNEELRKGGQVSSLLMQAIQVSRISIVVFSKNYANSKSCLKELQRIMDCRRSIGQVVFPVFYNVEPSHVRHQRGAFGRSFQDLKKTISKNKAQLWGTALRDAASLTGFHLNNSRNESEDINKIIETITDSLDNTVLFVAQHPVGVQPRAQHVIKLLNYQESKDVMLLGILGIGGIGKTTIAKAIYNQIHPHFESYCFLSNIREFWEQSTTSQVYLQERLLSDIYKTTKIKIHNIESGIFILQQRLRHKQALLILDDVDKIEQLKALCGSREWFGPGSRIIITTRDEHLLKLLQVDHISRMPEMDQDESIQHFSWHAFKQPCPREDFDQLSRNVVAYCGGLPLALEVIGSFLFDKKVREWESVVDKLKRIPNDQVQRKLRISFDSLNDDTEKEIFLDIAFFFIGMDRNDVVHILDEYDAAIGISVLVDRSLVTIDNNNKLGMHDLLRDMGREIVREKSPKEPEERSRLWLQKDVYHVLSNHMGTKAIEGLTLKLTNSVSLEAKMFKMMKRLRLLQLAGVQLDGNFEDLPKHLRWLHWHECYLKYIPSNFDQASLVAIELEFSNLKFVWKEAKFMEKLKVLNLNHSYNLTQTPDFSYLPNLEKLLLKDCSSLSTISDTIGHLKKILVINLEDCTSLGNLPRSFYKLKSLTTLIISGCSMIDKLEEDLEQMESLITLIADKTAITQVPFSIVRSKSIGYVSLCGYEGFSRDVFPSLIWSWMSPTSKYNLSSMVQASSSALIPLDLPKLRSLWVKCESDLQLNGGVARILATLFATYNKELEATPTTSLVMENIKGSEIFDLSNQSHNSESLKCLIIEVGMKSHATNALKDKILQGLMTTTNEFSDKYWLTFGSKGSSVVFEVPQMNGCNLKAVTLRILYSSSSETILSECLKNVLIINYTKSTIQVYKQDTLASLEDEEGKTITSHIEPGNKVEILLVGYKFIVKRTTVYLIYDEPVDHYAEHYHADVIVSSDNYIISSDNNDMESDECSSVSGGGHDRSKKKYSCFYWCWR 1061
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02192 1061 Gene3D Ribonuclease Inhibitor 523 900 IPR032675 -
Aip02g02192 1061 Gene3D - 354 438 IPR042197 -
Aip02g02192 1061 PRINTS Disease resistance protein signature 218 233 - -
Aip02g02192 1061 PRINTS Disease resistance protein signature 296 310 - -
Aip02g02192 1061 PRINTS Disease resistance protein signature 389 403 - -
Aip02g02192 1061 PRINTS Disease resistance protein signature 646 662 - -
Aip02g02192 1061 Gene3D - 189 349 IPR027417 -
Aip02g02192 1061 ProSiteProfiles TIR domain profile. 18 183 IPR000157 GO:0007165
Aip02g02192 1061 SMART till_3 19 157 IPR000157 GO:0007165
Aip02g02192 1061 SUPERFAMILY "Winged helix" DNA-binding domain 425 529 IPR036390 -
Aip02g02192 1061 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 996 IPR044974 GO:0006952
Aip02g02192 1061 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 159 IPR035897 -
Aip02g02192 1061 Pfam NB-ARC domain 202 424 IPR002182 GO:0043531
Aip02g02192 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
Aip02g02192 1061 SUPERFAMILY L domain-like 541 852 - -
Aip02g02192 1061 Gene3D - 13 188 IPR035897 -
Aip02g02192 1061 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 29 996 - -
Aip02g02192 1061 Coils Coil 710 730 - -
Aip02g02192 1061 Pfam TIR domain 20 183 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip02g02192 Aip-Chr2 92391877 92399705 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02192 20 740 WRKY Transcription Factor Family AT4G12020 31.494 7.90e-84 297
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02192 - - ahf:112749677 1311.21