Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02191 ATGTCTTCCCAAAACCAGGACCCCGAATTCACATTCAATCCCCACACAACAATCATGTATGACGTGTACATAAGTTTCGAACCCCACTACCCTTCCCACCCTTTCATTTCACTTCTCTCTGGCGCTCTCAAACGTGCTGGAGTGCATCTTTTTCTGGACAACTACATGAAGCCAAAAAGTAAAGACCTTATACTATCTAGCGTAATCAAAGGATCCAGAGTTTCTATCGTAGTTTTCACTACCGATTTTGCTTGTACAACCTGGAGTTTGAAAGAGCTTGAGAAAATCATGGAGTATCGCAGCAGCAGAGGTCAGCAAGTTGTGCCTGTGTTCTATGAGGTAGATCCCGAGGAAGTGTTTAATCAGACTGGCCATTTCGGAGAAGCTTTGTTGGCTACTCTTGCAAGAACTTCAACCAATCAAGCCAAGGTGTTGAGTTATAGGACCGCGCTAAAAGAAGCTGCTGCCATTTCACCAAGGTTTCTCACCAATTTTCGGGATAGAAGCAACACCATAGATAGTATCGTTGGACATGTTACCTCTTTGCTAGATTCAACTGCCTTATTCGTTGCAGAACATCCAGTGGGAGTAAACTCTCACGTGCAAGATTTGATTCAACTGTTAGATAATAAGAAATCAGATGGTGTTTTCATTATGGCAATATGGGGAATGGGAGGAATAGGTAAAACAACAGTTGCCAAAGCCCTCTACAATCAAATTAGTCACAATTTTGATGTGAGGAAATTTGTCCCGGACATAGATGAAAGGATGGAGGATTTCCCAAGAAGGTGGCCTTTGGGCATTATAGAAGAGGAGCTTCTTTTGTTTCTCAAAGAACAAGTTGCAACAAAAGCTTGCAATTTCGACTCAACAAGTGTTATATGGTGGGAAGGAATTCGTTGTGTAAAGGTATTGCTTGTACTTGACAATGTGAGAAGTGAAAAAGAGCTAGAGGTTTTGCCTGTAACTTGTGAATGCTTTGGTCCTGGGAGTATAATAATCATCACCACAAGGACTAAACATGATCAGTTTAATGAGACTGGAATTAATCATGTTTACAGACTGAAAGAAATGGATTACAACGAATGTGTTGAGCTTTTTAGTCAGAGTGCTTTCAAGAAAGCAACTCCTGAAAGGACTTATGCTGATCTGATCAATCGTGCACTTGAATATTCTGATGGATTGCCACTAGCTCTTGTGGCGGTTGGATCTGTATTATTTGAAAGAAGTAGAGTAGAGTGGGACAGTGTATTGGAAAGGCTTAAAAGATTTCCCCTTCAAGATGTATGGCAAGTTTTAAGAAAAAGCATTGATTCTTTGGGATATGATATGAAGCAAATGTTTCTTGTGCTAGCTTATTTGAGTCATTTCTTTATTGGAATGGACCGAAATGATGTAACTCAAATATTACAAAAAGCTGGATGTGATGTGaAAAACCCCCAAAATAAAGTCAAAGAGCAGGATTGGAGGAAAGCACTCCGTGATGTCGGTTCCACTGCTGGATTTGTTGTTCAAAATTGGAGGAATGAAAGTGAGGATATTAAGAAGATTGTTGAACATGTTACTCATATGCTAGACCTGAATGAATTGTTCATTGCTAATCATCCAGTAGGAGTAGAATCTCGTGTAAAAGAGCTGATTGAACTACTAAAAAGCCATCAATCAGAAGATCCTCTACTATTAGGCATATGGGGCATGGGAGGGATCGGTAAAACAACCATTGCCAAAGCAGTTTATAATAAAATTTGCCGTCAGTTTGATGGTCGATGTTTCCTCTTAAATATCAGGGAAGTTTGGGATCAAGATAATGGTGGCCTTCATTTGCAGCAGCAACTTCTTTCTTCTGTCTATAAGACAACAAAAATAAAGATACAGAACATAGAATCTGGAAAATCAATATTAGAGAAAAGGCTTGGACAGAAAAGGATACTTGTTGTACTTGATGATGTGGATAAATTGGAGCAACTTAATGCTTTGGCTGCAAGCTATAAATGGTTCTGTCCAAGGAGTATAATAATCATCACAACAAGAGATGAAAGATTTCTTAGTTGGCTTGAAATTGACAAAAGATACAAAATGGAAGGGTTGAATGAGGAAGAATCTATTGAACTTTTCAGTTGGCATGCATTCAAAGAACCACGTCCTAGGAAAAAATTTGCTACACTTTGTGGTGAAGTTATTTCCTATTGTGGGAATTTGccattagctcttgaggtcattgggtcacatttgtttgaaaggggaataaaagagtggaagagtgtcttgaacaaactcaaaagcattcccaataaagaagtgcaaaagaagcttaagataagctttgatggtttaagtgatgacaaagatagagaaatattccttgatatagcttttttctttattggaatggacaaaaatgatgtcactgatatactaaatggttgtggacattctgctggaattggaataagtattcttttggagcgatgtcttgtaactgttgacactaagaataaacttcgaatgcatggtttgctgagagacatgggaagagaaatcattcgcgagagttctccaacaaaacctgaagaacgtagtaggttatggcattcagaggaGGTGCTTGATGTATTATCAAAAGACTTGGGAACAAAAGCTACCGAGGGAATTGCTTTGAAGTTATCAAGGATGAATCCAATTTGTTTGAAGACCAAAGCATTTAAGTACATGAGGAGACTCAGATTACTTCAACTTGCTGGTGTGCAACTTAAAGGAAACTTCAAACACCTTTCGACAGACCTTCGATGGCTATGCTGGCATGGATGCCCTTCAAGATATACAGAAGCAAAGTTTGATCAAAGAAATTTAGTTGCCATTGACTTAAAATATAGCTACCTCCAACATGTATGGAAGAAGGGCCAGATGATGAAGAAACTGAAAATTCTCAATCTTAGTCATTCCGAACACTTGACACATACTCCAGACTTTTCATACTTGCCCAATCTTAAAAAGTTAATACTCAAAGATTGTCCAAGATTGTGTTCAATCTCCCACACCATTGGACATCTCAAACGAATTCTTCTAATCAACTTGAAAGATTGTACAAGCCTTCGAGTGCTTCCGAAAAGCATCTACAAATTAAAATCTCTCAAAACTCTCATTCTGTCTGGATGTACAAAGATTGACAAATTGGAAGAGGACTTAGAACAAATGAAATCTTTGACAACATTGATGGCAGATAACACTGCTATAACCAAAGTTCCCTATGCACTACCAAGATTAAACAACATTGTTTACATTTCTTTGTGTGGGTTCGAAGGATTGTGTCGTAATGTGTTTCCTTCAATCATCTGGTCATGGACCTCTCCAACAAATAATCTCTCACCCCAAATGCATACAAATTTGGACCTGTCAAATCTTGTTTCCATAATGGTATCCAATAGCAGTAGTTCCCATGCAGGCCTATCATCCATCATTAAAGAGCTTCCAAAGGTTCAGAATCTTCAATTGGAATGTGGCTCACAACTAAACATGTCAGGAAATGTAAATTTAGTTTCTTCTAGTGTCACAAATTTTAAGGAACTGGAAGCACCATCAAGAACATCACATGTCTCAAATATGAATACCTCAGCATTAGGTGGTTGTTGCAGTGAAGGTTACATTTCTAGATCAGAGAACTCCTTGAATATCATTTTAATCCGAATGGGAATGAATTGCTTAATCACAAAAGCACTCATTCAGAGAATTTCACAGAAGCTTACTAGCAATTTAGCTGGAGATTTTTTGCTTCCTGGAAACAACAATCCTGATTGGTTAACCTTCAGCAGTGAAGGTTCTTCTGTGAGTTTTGAAGTTCCAAAAGTTAATGGCCGCAGCTTGAAGGCGGTGATACTGTGCATTGTTTACTCTTCTTCCTCAAACATCATAGCATCTGAAGGAATAACTCTAAAGAATATGATGATCATAAATTACACAAAAGCCACCACTCATGTCTATGAGGGAGATACCTTGTCTTCACTTAAAGGTGAAGACTGGCAGAGTGTCTTATCAAATCTTGAAGCCAGTGACAAAGTGCAGGTTGTTGCTGTTGTTTTGGGGTATGGATTCAAAGTGAAGGAAACAACAGTTTATCTCATATATGATGATCCAATTGACCAAACCATGAAGCAACAGGATGAAGGTATTGTTTCTGGTATTGATATGGTAGCAGATGAGAATGTAACTGTCCATGGTGGAGATGAAAAAGAAGAATTTAAACTCCTTAGAAAGAGAAAATTCCAAGAGTATGATGATACATCTAGTGAAGATGACAGAGTGGGAGATGTTTAG 4311 0.3489 MSSQNQDPEFTFNPHTTIMYDVYISFEPHYPSHPFISLLSGALKRAGVHLFLDNYMKPKSKDLILSSVIKGSRVSIVVFTTDFACTTWSLKELEKIMEYRSSRGQQVVPVFYEVDPEEVFNQTGHFGEALLATLARTSTNQAKVLSYRTALKEAAAISPRFLTNFRDRSNTIDSIVGHVTSLLDSTALFVAEHPVGVNSHVQDLIQLLDNKKSDGVFIMAIWGMGGIGKTTVAKALYNQISHNFDVRKFVPDIDERMEDFPRRWPLGIIEEELLLFLKEQVATKACNFDSTSVIWWEGIRCVKVLLVLDNVRSEKELEVLPVTCECFGPGSIIIITTRTKHDQFNETGINHVYRLKEMDYNECVELFSQSAFKKATPERTYADLINRALEYSDGLPLALVAVGSVLFERSRVEWDSVLERLKRFPLQDVWQVLRKSIDSLGYDMKQMFLVLAYLSHFFIGMDRNDVTQILQKAGCDVKNPQNKVKEQDWRKALRDVGSTAGFVVQNWRNESEDIKKIVEHVTHMLDLNELFIANHPVGVESRVKELIELLKSHQSEDPLLLGIWGMGGIGKTTIAKAVYNKICRQFDGRCFLLNIREVWDQDNGGLHLQQQLLSSVYKTTKIKIQNIESGKSILEKRLGQKRILVVLDDVDKLEQLNALAASYKWFCPRSIIIITTRDERFLSWLEIDKRYKMEGLNEEESIELFSWHAFKEPRPRKKFATLCGEVISYCGNLPLALEVIGSHLFERGIKEWKSVLNKLKSIPNKEVQKKLKISFDGLSDDKDREIFLDIAFFFIGMDKNDVTDILNGCGHSAGIGISILLERCLVTVDTKNKLRMHGLLRDMGREIIRESSPTKPEERSRLWHSEEVLDVLSKDLGTKATEGIALKLSRMNPICLKTKAFKYMRRLRLLQLAGVQLKGNFKHLSTDLRWLCWHGCPSRYTEAKFDQRNLVAIDLKYSYLQHVWKKGQMMKKLKILNLSHSEHLTHTPDFSYLPNLKKLILKDCPRLCSISHTIGHLKRILLINLKDCTSLRVLPKSIYKLKSLKTLILSGCTKIDKLEEDLEQMKSLTTLMADNTAITKVPYALPRLNNIVYISLCGFEGLCRNVFPSIIWSWTSPTNNLSPQMHTNLDLSNLVSIMVSNSSSSHAGLSSIIKELPKVQNLQLECGSQLNMSGNVNLVSSSVTNFKELEAPSRTSHVSNMNTSALGGCCSEGYISRSENSLNIILIRMGMNCLITKALIQRISQKLTSNLAGDFLLPGNNNPDWLTFSSEGSSVSFEVPKVNGRSLKAVILCIVYSSSSNIIASEGITLKNMMIINYTKATTHVYEGDTLSSLKGEDWQSVLSNLEASDKVQVVAVVLGYGFKVKETTVYLIYDDPIDQTMKQQDEGIVSGIDMVADENVTVHGGDEKEEFKLLRKRKFQEYDDTSSEDDRVGDV 1436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02191 1436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 451 IPR027417 -
Aip02g02191 1436 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 159 IPR035897 -
Aip02g02191 1436 Gene3D - 17 183 IPR035897 -
Aip02g02191 1436 ProSiteProfiles TIR domain profile. 18 155 IPR000157 GO:0007165
Aip02g02191 1436 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 477 IPR044974 GO:0006952
Aip02g02191 1436 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 484 1370 IPR044974 GO:0006952
Aip02g02191 1436 Gene3D - 531 689 IPR027417 -
Aip02g02191 1436 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 30 477 - -
Aip02g02191 1436 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 484 1370 - -
Aip02g02191 1436 SMART till_3 19 157 IPR000157 GO:0007165
Aip02g02191 1436 Pfam NB-ARC domain 540 770 IPR002182 GO:0043531
Aip02g02191 1436 Pfam NB-ARC domain 199 440 IPR002182 GO:0043531
Aip02g02191 1436 SUPERFAMILY L domain-like 884 1184 - -
Aip02g02191 1436 Gene3D - 448 530 IPR035897 -
Aip02g02191 1436 Gene3D - 184 345 IPR027417 -
Aip02g02191 1436 SUPERFAMILY "Winged helix" DNA-binding domain 766 872 IPR036390 -
Aip02g02191 1436 PRINTS Disease resistance protein signature 1039 1055 - -
Aip02g02191 1436 PRINTS Disease resistance protein signature 560 575 - -
Aip02g02191 1436 PRINTS Disease resistance protein signature 730 744 - -
Aip02g02191 1436 PRINTS Disease resistance protein signature 637 651 - -
Aip02g02191 1436 CDD AAA 537 690 - -
Aip02g02191 1436 Gene3D Ribonuclease Inhibitor 855 1243 IPR032675 -
Aip02g02191 1436 Gene3D - 695 779 IPR042197 -
Aip02g02191 1436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 790 IPR027417 -
Aip02g02191 1436 Gene3D - 358 447 IPR042197 -
Aip02g02191 1436 Pfam TIR domain 20 180 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02191 Aip-Chr2 92362741 92369901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02191 195 474 WRKY Transcription Factor Family AT5G45050 29.893 1.07e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02191 - - ahf:112727932 1868.59