Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02189 ATGGCTCATCCACCCCAACCCATTAGCTCAGGCCACTTTCACCTTTATTGGCTACACTTAGCTAAAACAAGATCTTCCAGCATCCTGCATAAGCATCCTAAGCCTCAGCTTGTATATGACTTGAATCTCTATGCTGCACTCAGATATGTTGGACTGCATGTTTTAGCAGACCAAGCCGTGGTCAAGACTAATGAACTTTTATTATCTGGCGCAATCGAACGATGCAGAGTTTCTATCATAGTTTTCACAATAGATTATGCTAAATCAGCCCTGTGTTTGCAAGAGCTGGTGAAAATAATGGAGTGTCATCGGAGCAGCAAAGATCAGAAGGTTGTGCCCGTGTTCTATTGCTTAGATCCCTCCCAAGTATGCAATCTGAGCGGTTATTTTGGGCAGATTTTGTCTGATACTCTGCAAGGAACGGATGAAAACATGATGTTGAGTTTTGCGACCGCGCTTCGACAAGTTGCTTCCATTTCACCCAGGTTTCTTCCGGATATAGGGAATAAAATAAAAGTTATGAACGATATAGTTGGACATGTTACATCCTTGATAGATTCAGCGAAATTATTCATTGCAAAGCATCCGGTGGGAGTAGACTCTCGTGTGCAAGATTTGATTCAACTCTTAAACAATCAGAATGAAGATGGTGTTCTGATAATGGCGATATGGGGAATGGCGGGAATAGGTAAAACAACTATCGCTAAAGCCCTCTACAACCAAATTAGCCACAACTTTGAGGTGAAGAAATTTGTCCCAAACATCAAGGATAGAATAATGAAAAATTCAGCAAGAACGTCTAGTTTAGAAGAGGAGCTTCTATTATTTTTCCAAGAACGAGTTACAACAAAAACGCATAACGCTGACTCAACAAGAGATAAATGGTGGGGACTTCCTCACATAAAGGTACTTCTTATACTTGACAATGTAAGAAGTGAAAGAGAACTGGAGGTTTTGCCAGTAACTCGTGAATGCTTTGGTCCTGGGAGTATAATAATCATCACGACAAGAACTAAACATGATCGACTTCATGAGATTGGAGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTATTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGTGTGTTGGCTCTGCTGTATCTGAAAAAAGCAAGGAGCAGAGTTGGAGGAAAGCACTCCGTGAAGTCGGGTGCATTGCAGGGTTTGTCATCCGAAAATCCAGGAATGAAAGTGAGGATATTAAGAACATTGTTGAACATATTACTCATATGCTGGACATGAAGGAACTGTTTGTTGCTAATCATCCGGTAGGAGTTGAATCTCGTGTTGAAGAGGTGATTGAACTGTTAAAAGACCAGCAGCAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGAGTGGTAAAACAACCATTAGCAAAGCGATTTATAATAAACTTTTCCGCGAGTTTGAAGGTCGGTGCTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTTATTTACAACAGCAACTTCTTTCTTCTATCTTCAAGACAACGAAAATAAAGGTAGAAAACATTGAATCTGGAAAGTCAATATTGGAAAAAAGACTTGGCCAGAAAAAGATTCTTCTTGTACTTGATGATGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGCCGTAAATGGTTCTGTCCCGGTAGCATAATAATCATCACAACAAGAGACGAGCATCTTCTAAGTTGTCTTAGAATTGACAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATCCTCCAGAATATACAACTGCAAACTTTTATCTGGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCAACCTAGTATGGAAGAAGGGTCAGATGATGAAGAATCTAAAAATTCTCAATCTTGGTCATTCTCAACACTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACGTCGGTTTCTCATACCATTGAACATCTCAAGCAAGTTCTTCTAATCAATTTGAAAGGGTGTTCAAGGCTTCGTGTACTTCCAAGAAGCATCTACAAGTTGAGATCTCTCAAAACTCTCATTCTCTCAGGATGTTCATTGATTGATAAGCTAGAGGAAGACATAGAACAGATGGAATCATTGGCAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTCATGCACTACTAAGAGTTGCCCATAGTTGA 2415 0.3909 MAHPPQPISSGHFHLYWLHLAKTRSSSILHKHPKPQLVYDLNLYAALRYVGLHVLADQAVVKTNELLLSGAIERCRVSIIVFTIDYAKSALCLQELVKIMECHRSSKDQKVVPVFYCLDPSQVCNLSGYFGQILSDTLQGTDENMMLSFATALRQVASISPRFLPDIGNKIKVMNDIVGHVTSLIDSAKLFIAKHPVGVDSRVQDLIQLLNNQNEDGVLIMAIWGMAGIGKTTIAKALYNQISHNFEVKKFVPNIKDRIMKNSARTSSLEEELLLFFQERVTTKTHNADSTRDKWWGLPHIKVLLILDNVRSERELEVLPVTRECFGPGSIIIITTRTKHDRLHEIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSYSGLINYAIEYSDGLPLALVCVGSAVSEKSKEQSWRKALREVGCIAGFVIRKSRNESEDIKNIVEHITHMLDMKELFVANHPVGVESRVEEVIELLKDQQQENPLLLGIWGMGGSGKTTISKAIYNKLFREFEGRCFLLNIREVWDQDNGILYLQQQLLSSIFKTTKIKVENIESGKSILEKRLGQKKILLVLDDVDKLEQLNSLAASRKWFCPGSIIIITTRDEHLLSCLRIDKLYSMKELNDKESIELFSWHAFKEPCPKEEFASLANPPEYTTANFYLGNLVAIDFKYSKLNLVWKKGQMMKNLKILNLGHSQHLTQTPDFSNMPNLEKLILKYCPKLTSVSHTIEHLKQVLLINLKGCSRLRVLPRSIYKLRSLKTLILSGCSLIDKLEEDIEQMESLATLMADKTAITQVPHALLRVAHS 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02189 804 SMART AAA_5 217 362 IPR003593 -
Aip02g02189 804 SMART AAA_5 482 617 IPR003593 -
Aip02g02189 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 408 641 IPR044974 GO:0006952
Aip02g02189 804 SMART till_3 32 159 IPR000157 GO:0007165
Aip02g02189 804 ProSiteProfiles TIR domain profile. 22 157 IPR000157 GO:0007165
Aip02g02189 804 Gene3D Ribonuclease Inhibitor 642 803 IPR032675 -
Aip02g02189 804 Gene3D - 39 187 IPR035897 -
Aip02g02189 804 SUPERFAMILY Toll/Interleukin receptor TIR domain 44 137 IPR035897 -
Aip02g02189 804 SUPERFAMILY L domain-like 659 796 - -
Aip02g02189 804 CDD AAA 462 604 - -
Aip02g02189 804 Pfam TIR domain 68 171 IPR000157 GO:0007165
Aip02g02189 804 Gene3D - 448 613 IPR027417 -
Aip02g02189 804 Gene3D - 188 344 IPR027417 -
Aip02g02189 804 Gene3D - 357 447 IPR042197 -
Aip02g02189 804 PRINTS Disease resistance protein signature 220 235 - -
Aip02g02189 804 PRINTS Disease resistance protein signature 297 311 - -
Aip02g02189 804 PRINTS Disease resistance protein signature 391 405 - -
Aip02g02189 804 PRINTS Disease resistance protein signature 752 768 - -
Aip02g02189 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 650 800 IPR044974 GO:0006952
Aip02g02189 804 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 650 800 - -
Aip02g02189 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 449 647 IPR027417 -
Aip02g02189 804 Coils Coil 768 788 - -
Aip02g02189 804 Pfam NB-ARC domain 465 641 IPR002182 GO:0043531
Aip02g02189 804 Pfam NB-ARC domain 201 436 IPR002182 GO:0043531
Aip02g02189 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 425 IPR027417 -
Aip02g02189 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 423 IPR044974 GO:0006952
Aip02g02189 804 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 408 641 - -
Aip02g02189 804 CDD AAA 197 337 - -
Aip02g02189 804 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 42 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02189 Aip-Chr2 92320865 92326820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02189 697 796 WRKY Transcription Factor Family AT5G45050 33.000 6.26e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02189 - - aip:107627622 716.457