Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02186 ATGACTTCCTCCACCACCAGAAACCAATATAGGGTTAATCCCTACAGAACAAGGATGTATGATGTGTTCATCAGTGTCAGTCGCCAACACCCTCATCGTCAACACTTCGCTTCACGCCTCTGTGGCGCTCTCATAGATGCTGGGGTACATGTTTGTGACGAGATACTTCTTAGAACAGGAGACTTTGTCTTTTCCCAGAGTGTGGGTGTACCGGCCGGAATCGAAGGTTCCAGAGTTTCTGTCATCATCTTCACAAAAGAATACTTGGATTCAGCATGGTGTTTCCAAGAGCTACTGAAAATTATGGAGTGTCGAAGTAGCAAGGCTCAGGTGGTTGTTCCAGTGTTCTGCGGTGTAGATCCGTCAGAAGTAAGGGATTATTCTGGTCACTTTGGAAGAGTTATGACTTCTCTTGATGGAAAATCAACACCGCGGCCGTGCCATGTTACCACGCTTCAAGAAGCCGCTGACATTTCACCAAGTTTTGTGACAGTTTCCGGGAAGGAAATGGAATCTATCAAGAGTATTGTTGAACATGTTGCTTTTTTAATAGATTCAAGAGACCTATTTGTTGCACAGCATCCTGTGGGAATTAAATCTCGTGTGCAAGATTTAATTCAAATATTAAACATTCATGAGAAACCAAATGATGTTCTTGTACTAGGGATTTGGGGAATGGGAGGAGCTGGTAAGACAACAATTGCCAAAGCTCTCTACAATAAAATTCGTCGTAAGTTTGAAGTGAGAAAATTCATCCCAGATATTAGCGATAGAATGGAGCAAAATGAAATGGATTCTTTGGCATCTTTACGAGATGAGATTCTTCATTGCATGAACCGAAAGAAAGCACTTCTTATACTTGACAATGTGGGAAGCAACAAAGAATTAGAGAATTTGCTTGTAAGTCATACATTGTTTGGTCCTGGTAGCATAATAATCATCACAACTAGGAATAAGCAACCACTTTATCTGGTTAGAGTTGACCATATATATAGAGTGAAAGAAATGGACTACAACGAATGCGTTGAGCTTTTTAGTTGGTGTGCATTCAAGAAAGCAACTCCTAGAAGAACATTTGCTGGGCTTATTAAGGAAGTAGTTGAATATTCTGATGGATTGCCATTGGCTATTGTAGCTTTTGGCTGTGTTTTAAGTGGAAGAAATATAGCAGAGTGGGGGATTGTATTGGATAGGGTCAAGATATTTCCCATTCAAGATGTCCAAGAGGTGTTAAAAATAAGCATTAATCGTTTGGATCACAAAGAGAAACAAGTATTTCTTGAGATAGCTTATTTCAGTCATGCGTTTAGTGGAATGTCGCGAAAAGATGCAATGCAGATATTAAATGGGTCTGAAGGAATTTTGGGGCTTGAACGCCAGAGTCTAGTGACGTTTGAGGAGAACAAGCTTCGCATGCATCCGTTGCTACAAGAGATAGGAAGAGAAATCTATCAGAAGGAATCATCTTCATTTAATCCTCAGCGAAAGGTatatgatgtattcttgagctttcgtgGGTTTGTCATTCAACAATCAAGAAACGAAAGTGAGGCTATTAAGAACATAATTGAACAAGTCACTCGGATGCTAGACATGAAGGACCTGTTTGTTGCTAACCATCCAGTAGGAGTAGAACTTCGGGTTGAAGAGGTGATTAAAATGTTGAGGAATCAAAACACAAAAGATCCTCTATTATTAGGGATATGGGGCATGGGAGGGATCGGTAAAACAACTATTGCCAAAGCAGTTTATAACAAAATTTGTCGTGAATTCGAGGGTCGATGCTTCCTCTTAAATATCAGGGAAGTTTGGGATCAAGATAATGGCGGAGTTCATTTACAGGAACAACTTCTCTCCAGTATATACCAAACAATGAAACTAAAGATACAAAACGTGGAATCTGGAAAAGTGATATTAGAGGAAAGACTTGGCCAAAAGAAGATACTTGTTGTACTTGATGACGTGGACAAATTGGAGCAACTAAATGCTTTGGCTGCAAATCGTAAATGGTTCTGCCCAGGGAGTGTAATAATCATCACAACAAGGGATCAACGTCTTCTTAATTGGCTTCGAGTTGACAAGGTATATAGGCTGGAAAAGTTGAGTGACAGAGAATCTGTCGAACTTTTTAGTTGGCATGCATTTAAGGAACCATTTCCTATTGAAGAATTTGTCGGGTTTACAAGTAAAGTGGTCTCCTACTGTGGGAgattacctagattatggaatccagaagaagttcttgatgtcttatcaaaagacatgGGAACAAAAGCTATTCAGGGACTTGCTTTGAAGTTGTCAAGGATGAAACCAATTCATTTGAAGACCAATGCTTTTAGGAAGATGAAGAGACTAAGATTGCTTCAACTTGGTGGTGTACAACTCGATGGAGACTTTAAATACCTCTCAACCGATCTTCGATGGTTGTCCTGGCATGGATGTTCTTCAGAATATACAACTATAGGTTTTGATCAGGGAAATTTAGTTGCCATTGACTTCAAATATAGCAATCTCCAGCTAGTATGGAAGAAGAGGCAGATGCTAATGAAGTTGGAAATTCTCAATCTTAGTCATTCTCAATATTTGACAGAAACTCCTGACTTTTCAAACATTCCTAATCTTAAAAAGTTAATACTCAAATATTGTTCAAGGCTATCTTTGGTTTCCCATACCATTGGAGATCTTAAAAAAATTCTTCTAGTCAATCTGAAAGGTTGCACAAGCCTTCGTATACTTCCAAGAAGCATCTACAAGTTGAAATTTCTGAAAACTCTCATTCTTTCTGGATGTTCAGAAATTAACAAGTTGGAAGAGGATTTAGAACAGATGGAATCTTTGACAACTTTGATGGCCAATAAAACTGCTATAACACAAGTGCCAAATGCATTGATAAGATTGAAAAGCATTGTATATGTTTCTTTGTGTGGCTttgaaggtgttagaaacaagagactgagagagtga 2967 0.3751 MTSSTTRNQYRVNPYRTRMYDVFISVSRQHPHRQHFASRLCGALIDAGVHVCDEILLRTGDFVFSQSVGVPAGIEGSRVSVIIFTKEYLDSAWCFQELLKIMECRSSKAQVVVPVFCGVDPSEVRDYSGHFGRVMTSLDGKSTPRPCHVTTLQEAADISPSFVTVSGKEMESIKSIVEHVAFLIDSRDLFVAQHPVGIKSRVQDLIQILNIHEKPNDVLVLGIWGMGGAGKTTIAKALYNKIRRKFEVRKFIPDISDRMEQNEMDSLASLRDEILHCMNRKKALLILDNVGSNKELENLLVSHTLFGPGSIIIITTRNKQPLYLVRVDHIYRVKEMDYNECVELFSWCAFKKATPRRTFAGLIKEVVEYSDGLPLAIVAFGCVLSGRNIAEWGIVLDRVKIFPIQDVQEVLKISINRLDHKEKQVFLEIAYFSHAFSGMSRKDAMQILNGSEGILGLERQSLVTFEENKLRMHPLLQEIGREIYQKESSSFNPQRKVYDVFLSFRGFVIQQSRNESEAIKNIIEQVTRMLDMKDLFVANHPVGVELRVEEVIKMLRNQNTKDPLLLGIWGMGGIGKTTIAKAVYNKICREFEGRCFLLNIREVWDQDNGGVHLQEQLLSSIYQTMKLKIQNVESGKVILEERLGQKKILVVLDDVDKLEQLNALAANRKWFCPGSVIIITTRDQRLLNWLRVDKVYRLEKLSDRESVELFSWHAFKEPFPIEEFVGFTSKVVSYCGRLPRLWNPEEVLDVLSKDMGTKAIQGLALKLSRMKPIHLKTNAFRKMKRLRLLQLGGVQLDGDFKYLSTDLRWLSWHGCSSEYTTIGFDQGNLVAIDFKYSNLQLVWKKRQMLMKLEILNLSHSQYLTETPDFSNIPNLKKLILKYCSRLSLVSHTIGDLKKILLVNLKGCTSLRILPRSIYKLKFLKTLILSGCSEINKLEEDLEQMESLTTLMANKTAITQVPNALIRLKSIVYVSLCGFEGVRNKRLRE 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02186 988 Coils Coil 981 988 - -
Aip02g02186 988 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 505 739 - -
Aip02g02186 988 Coils Coil 934 954 - -
Aip02g02186 988 Pfam NB-ARC domain 202 407 IPR002182 GO:0043531
Aip02g02186 988 Pfam NB-ARC domain 547 739 IPR002182 GO:0043531
Aip02g02186 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 486 IPR044974 GO:0006952
Aip02g02186 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 427 IPR027417 -
Aip02g02186 988 Gene3D - 185 328 IPR027417 -
Aip02g02186 988 Gene3D - 523 694 IPR027417 -
Aip02g02186 988 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 137 IPR035897 -
Aip02g02186 988 SMART AAA_5 217 337 IPR003593 -
Aip02g02186 988 SMART AAA_5 562 702 IPR003593 -
Aip02g02186 988 Gene3D - 336 419 IPR042197 -
Aip02g02186 988 Gene3D - 14 184 IPR035897 -
Aip02g02186 988 CDD AAA 542 700 - -
Aip02g02186 988 SUPERFAMILY L domain-like 764 977 - -
Aip02g02186 988 ProSiteProfiles TIR domain profile. 18 156 IPR000157 GO:0007165
Aip02g02186 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 740 984 IPR044974 GO:0006952
Aip02g02186 988 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 505 739 IPR044974 GO:0006952
Aip02g02186 988 CDD AAA 196 332 - -
Aip02g02186 988 Pfam TIR domain 20 142 IPR000157 GO:0007165
Aip02g02186 988 Gene3D Ribonuclease Inhibitor 749 985 IPR032675 -
Aip02g02186 988 PRINTS Disease resistance protein signature 370 384 - -
Aip02g02186 988 PRINTS Disease resistance protein signature 220 235 - -
Aip02g02186 988 PRINTS Disease resistance protein signature 277 291 - -
Aip02g02186 988 PRINTS Disease resistance protein signature 918 934 - -
Aip02g02186 988 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 535 741 IPR027417 -
Aip02g02186 988 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 740 984 - -
Aip02g02186 988 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 30 486 - -
Aip02g02186 988 SMART till_3 19 173 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02186 Aip-Chr2 92306051 92313958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02186 853 961 WRKY Transcription Factor Family AT5G45050 33.945 2.42e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02186 - - aip:107627622 665.225