Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02184 ATGGGACTCAACATAGAAGGTGTAAGCTCTCTGGGTACTTCTCTAAGTTTTGAAACCTCCTACACCCTCACTCGCTTGATCATTCAAGTCGTTGCTATGTCTTCCGAAAACCAGGAACCCCAATCCACATTCAATCCTTACAGAACAACGATGTGTGATGTGTACATTAGTGGCGAACCCCAAAACCCTCCTCATCCTTTTATTTCACATCTCTATGTTGCACTCAAAGGTTCTGGAGTATATGTTTTGGGGAATCACACAGAGCCCAACATTAATGACCTTTTCTTATCTGGCGCAATTGAAGGGTGCAGAGTTTCTATCATAGTTTTCACAACAGATTATGCTAAATCAACCGTGTGTTTGCAAGAGCTCGTGAAAATAATGGAGTGCCATCGGAGAAGCAAAGTTCAGAAGGTTGTGCCTGTGTTCTATTGCTTATATCCTTCAGAAGTAAGCAATCAGAGCGGTTATTTTGGAGAAGTTTTGTTAGATACTCTGGAAAGAAACTCAACAGATGAAAGCAAGGTGTTGAGTTATAGGACCGCACTTCGAGAAGCTTCGGCCATTTCACCCACGTTTCTGCCGGATATCTGGAATGAAAGAAAAGTTATAGAGAATATTGTTGGACATGTTACTTCTTTGCTAGATGCAACAGATTTATTCGTTGCACAGAATCCTGTGGGAGTACACTCTCATGTGCAAGATTTGATTCAATTGTTAAATAATCAGAATGAAGATGGTGTTCTGATAATGGCGATATGGGGAATGGCGGGTATAGGTAAAACAACTATCGCTAAAGCCCTCTACAACCAAATTAGCCACAACTTTGAGGTGAAGAAATTTGTCCCAAACATCAAGGATAGAATAATGAAAATTTCATCAAGAACGTCTAGTTTAGAAGAGGAGCTTCTATTATTTTTCCAAGAACGAGTTACAACAAAAACGCATAACGCTGACTCAACAAGAGATAAATGGTGGGGACTTCCTCACATAAAGGTACTTCTTATACTTGACGATGTAAGAAGTGAAAGAGAACTGGAGGTTTTGCCAGTAACTCGTGAATGCTTTGGTCCAGGGAGTATAATAATCATCACGACAAGAACTAAACAAGATCGGCTTCATGAGATTGGAGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTATTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGTGTGTTGGCTCTGCTGTATCGCCCGGATAA 1317 0.4009 MGLNIEGVSSLGTSLSFETSYTLTRLIIQVVAMSSENQEPQSTFNPYRTTMCDVYISGEPQNPPHPFISHLYVALKGSGVYVLGNHTEPNINDLFLSGAIEGCRVSIIVFTTDYAKSTVCLQELVKIMECHRRSKVQKVVPVFYCLYPSEVSNQSGYFGEVLLDTLERNSTDESKVLSYRTALREASAISPTFLPDIWNERKVIENIVGHVTSLLDATDLFVAQNPVGVHSHVQDLIQLLNNQNEDGVLIMAIWGMAGIGKTTIAKALYNQISHNFEVKKFVPNIKDRIMKISSRTSSLEEELLLFFQERVTTKTHNADSTRDKWWGLPHIKVLLILDDVRSERELEVLPVTRECFGPGSIIIITTRTKQDRLHEIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSYSGLINYAIEYSDGLPLALVCVGSAVSPG 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02184 438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 435 IPR027417 -
Aip02g02184 438 Pfam TIR domain 54 212 IPR000157 GO:0007165
Aip02g02184 438 Gene3D - 218 375 IPR027417 -
Aip02g02184 438 ProSiteProfiles TIR domain profile. 50 187 IPR000157 GO:0007165
Aip02g02184 438 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 60 433 - -
Aip02g02184 438 Gene3D - 49 217 IPR035897 -
Aip02g02184 438 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 60 433 IPR044974 GO:0006952
Aip02g02184 438 SUPERFAMILY Toll/Interleukin receptor TIR domain 51 188 IPR035897 -
Aip02g02184 438 PRINTS Disease resistance protein signature 250 265 - -
Aip02g02184 438 PRINTS Disease resistance protein signature 421 435 - -
Aip02g02184 438 PRINTS Disease resistance protein signature 327 341 - -
Aip02g02184 438 Pfam NB-ARC domain 231 435 IPR002182 GO:0043531
Aip02g02184 438 SMART till_3 51 189 IPR000157 GO:0007165
Aip02g02184 438 CDD AAA 233 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02184 Aip-Chr2 92227360 92228758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02184 67 428 WRKY Transcription Factor Family AT4G12020 27.371 5.42e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02184 - - aip:107627622 597.816