Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02183 GAATGAAAATGAGGATATTAAGAACATTGTTGAACAAGTTACTCATATGCTGGAAATGAAGGAATTGTTCGTTGCTAATCATCCCGTAGGAGTTGAATCTCGTGTTGAAGAGGTGATTCAACTATTAAAAGACCAGCAACAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGTGTGGTAAAACAACCATTGCCAAAGCGGTTTATAATAAAATTTTCCGTGAGTTTGAAGGTAGGTGTTTCCTCCTAAATATAAGAGAAGTTTGGGAACAAGATAATGGAATTCTTCATTTACAACAACAACTTCTTTCTGCTATCTACAAGACAACGAAAATAAAGATTGAAAACACTGAATCTGGAAAATCAATATTAGAGAGAAGACTTGGCCAGAAAAGGATACTTCTTGTACTTGATGTTGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGCCGTAAATGGTTCTGTCCCGGTAGCATAATAATCATCACAACAAGAGACGAGCATCTTCTATGTTGTCTTAGAATTGACAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGTAAttgggtcacatctgtttaataggaacgtatatgaatggaggagtgttttgaataaactcaaaaccattccaaacaatgatgtacagaagaagcttaaaataagttttgatggtctaagtgatgatagggatagagaaatatttcttgatgtagcatttttctttattggaatggacaaaaatgatgtgattgatatattaaatggctgcgggcattcagctgaaattggaataaatgttcttatggaacgatgccttattactgtggacactaagggaaaacttggcatgcatggtttgctgcgagacatgggaagagaaattattcgcgagagtttgccaatgaaacctgaggaacgtagtaggttgtggaatccagaggaagtgcttaatgtattatcaaaagacatgGGAACAAAAGCTATTGAGGGACTTGCTTTGAACCTGCCAAAGTCACTGAATCCAACCCACTTAAAGACAGAAGCATTTAAGGAGATGAAGAGACTCAGATTGCTTCAGTTTGCGAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACAGATCTTCGATGGTTGTGCTGGCATGAATGTCCTCCAGAATATACAACTGCAAACTTTGATCAAGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCGACCTAGTATGGAAGAAGGGTCAGATGATGGAGAATCTAAAATTTCTCAAGCTTAGTCATTCTCAACACTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTCAGTTTCTCATACCATTGAACATCTCAAACAAGTTCTTCTAATCAATTTGAAAGGGTGTTCAGAGCTTCGTGTACTTCCAAGAAGCATCTACAAGTTGAAATCTCTCAAAACTCTCATTCTATCAGGATGTTCTTTGATTGATAAGTTAGAGGAGGACATAGAACAGATGGAATCATTGGCAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTCATGCACTACTAAGACTAAAGAGCATTGTGTATATATCTTTGTGCGACTTTGAAGGATTATCGCGCAATGTGTTTCCTTCAATCATTTGGTCATGGACCTCTCCAACAAATAATTTCTCACCCCAAGTGCAAACACTTTTGGACTTGTCAAATCTTGTTTCCTTAATAGTCCCAAATAGAAATTCTCAAGGCCTATCATCCATTATCAGAGACCTTCCACAGGTTCAGAATGTTAGGATGGAGTGTGGCTCACAACTTCAAATAACAGGAGATGTAGCTTCAGATACTTGTAATGTCACAAACTGCAATGAAATGATAGTATCATCATGTGCATCATCAGTTGGTTGTTGCAGTGAAGGTGATGTTACTGAATCAGAAAATTCCTTGAATTCAATTTTAATCCAAATGGGAATGAATTGTTCTGTCACAAAGGCACTCAGAGAGAATATTTTGCAGAAATTTAGTGCCAGAGTACCTGGAGATTGTTTGCTTCCTGGCAACAAGAATCCTGATTGGTTAGCATACAGTAGCAAAGATTCTTCTGTAACTTTCCATGTCCCTCAAGTGAATGGGCGTAAGTTAAAGACAGTGTTGTTGTGTATAGTCTATTCTTCTTCCCCAAACAATGTACCGTCAGAAGCCCATATTGTCAAAAATCTGTTTATCATAAATCACACAAAAACCACCCCTTATGTCTATGATGGAGATACACTGGCTTCACTTAAAGATGAGGAGTGGCAGAAGGTAACATCAAACCTTGAAGCTGGTGACAAAGTGCAGATTGTTGTTGTTGCGGGGTTAGGATTCACAGTGAAGAAGATAGCAGTTTATCTCGTATATGCAGATCAACAAGCTGAAGGTATTGTTTGTGCTGACGATATGGTAGCATATGCAAATTTCACTGTTCATGGTGGAGATAACAATAAAAATTTGAACTCACTTGGAAAACGAAAATTCCAGAGAGTATGA 2695 0.3199 NENEDIKNIVEQVTHMLEMKELFVANHPVGVESRVEEVIQLLKDQQQENPLLLGIWGMGGCGKTTIAKAVYNKIFREFEGRCFLLNIREVWEQDNGILHLQQQLLSAIYKTTKIKIENTESGKSILERRLGQKRILLVLDVVDKLEQLNSLAASRKWFCPGSIIIITTRDEHLLCCLRIDKLYSMKELNDKESIELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEVIGSHLFNRNVYEWRSVLNKLKTIPNNDVQKKLKISFDGLSDDRDREIFLDVAFFFIGMDKNDVIDILNGCGHSAEIGINVLMERCLITVDTKGKLGMHGLLRDMGREIIRESLPMKPEERSRLWNPEEVLNVLSKDMGTKAIEGLALNLPKSLNPTHLKTEAFKEMKRLRLLQFANVQLVGDFKYLSTDLRWLCWHECPPEYTTANFDQGNLVAIDFKYSKLDLVWKKGQMMENLKFLKLSHSQHLTQTPDFSNMPNLEKLILKYCPKLTSVSHTIEHLKQVLLINLKGCSELRVLPRSIYKLKSLKTLILSGCSLIDKLEEDIEQMESLATLMADKTAITQVPHALLRLKSIVYISLCDFEGLSRNVFPSIIWSWTSPTNNFSPQVQTLLDLSNLVSLIVPNRNSQGLSSIIRDLPQVQNVRMECGSQLQITGDVASDTCNVTNCNEMIVSSCASSVGCCSEGDVTESENSLNSILIQMGMNCSVTKALRENILQKFSARVPGDCLLPGNKNPDWLAYSSKDSSVTFHVPQVNGRKLKTVLLCIVYSSSPNNVPSEAHIVKNLFIINHTKTTPYVYDGDTLASLKDEEWQKVTSNLEAGDKVQIVVVAGLGFTVKKIAVYLVYADQQAEGIVCADDMVAYANFTVHGGDNNKNLNSLGKRKFQRV 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02183 897 Coils Coil 548 568 - -
Aip02g02183 897 SUPERFAMILY "Winged helix" DNA-binding domain 258 364 IPR036390 -
Aip02g02183 897 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 281 IPR027417 -
Aip02g02183 897 Gene3D - 10 179 IPR027417 -
Aip02g02183 897 SUPERFAMILY L domain-like 386 685 - -
Aip02g02183 897 Pfam NB-ARC domain 32 261 IPR002182 GO:0043531
Aip02g02183 897 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 854 IPR044974 GO:0006952
Aip02g02183 897 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 854 - -
Aip02g02183 897 Gene3D - 187 271 IPR042197 -
Aip02g02183 897 PRINTS Disease resistance protein signature 532 548 - -
Aip02g02183 897 PRINTS Disease resistance protein signature 52 67 - -
Aip02g02183 897 PRINTS Disease resistance protein signature 129 143 - -
Aip02g02183 897 PRINTS Disease resistance protein signature 222 236 - -
Aip02g02183 897 Gene3D Ribonuclease Inhibitor 382 717 IPR032675 -
Aip02g02183 897 CDD AAA 29 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02183 Aip-Chr2 92177619 92226973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02183 29 549 WRKY Transcription Factor Family AT5G45050 32.123 2.78e-69 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02183 - - ahf:112727920 1647.48