Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02182 ATGTCTTCCCAAAACCAGGAACCCCAATTCATATATGATGCGTACATTAGTTCCGGTTTGCAGTTCCTTCATCCTTTTATTTCAGGTCTCTATGATGCACTCAAAAGTGTTGGACTGCATGTTTTAGCAGACCGCACCGAGCCCAAGACTAATATATCTGACGCAATCGAACGATGCAGAGTTTCTATCATAGTTTTCACAATAGCTTATGCTGAATCAACCTTATTCTTGCAAGAACTCGTGGACATAATGGAGTGTCATCGGAGGAAAGATCAGAAGGTTGTGCCCGTGTTCTATTGCTTAGATCCCTCCCAAGTATGCAATCGGAGCGGTTATTTTGGGCAGATTTTGTCGCTAACTCTGCAAGGTATCTCAAGGGATGAAAACAGGATGCTGAGTTATGAGACCGCCCTTCGACAAGCTGCTTCCATTTTACCCAGGTTTCTTCCAGATATCTGGAATAAGAGAGAAGTTATGAGCCATATAGTTGGACATGTTACATCCTTGATGGATTCAACGAAATTATTCATTGCAAAGCATCCGGTGGGAGTAGACTCTCGTGTGCAAGATTTGATTCAACTCTTAAACAATCAGAAAGCAGATGGTGTCCTCATAATAGCAATATGGGGAATGGCGGGAATAGGTAAAACTACAATTGCCAAAGCCCTCTACAACCAAATTAGCCACAATTTCGAGGTGAGAAAATTTGTCGCAGGCATCCAGGATAGGAAGGGGGATTATCCAATATGGGTGGCTTCCAAATTTATAGAAAAGAGGCTTCTTTTGTTTTTGAAAGACCAAGTTAAAACAAAAGCGCAAAACTTTGACTCAACAAGAAATATATGGTGGGAAGGAATTCGTTGCTTAAAGGTACTTCTTATACTTGATAATGTGAGAAGTGAAAGAGAACTGGAGGTTTTGCCAGTAACTCGTGAATGCTTTGGTCCAGGGAGTATAATAATCTTCACGACAAGGACTAAACATGATCGACTTCATGAGATTGGAGTTAATCATATATAG 1020 0.4088 MSSQNQEPQFIYDAYISSGLQFLHPFISGLYDALKSVGLHVLADRTEPKTNISDAIERCRVSIIVFTIAYAESTLFLQELVDIMECHRRKDQKVVPVFYCLDPSQVCNRSGYFGQILSLTLQGISRDENRMLSYETALRQAASILPRFLPDIWNKREVMSHIVGHVTSLMDSTKLFIAKHPVGVDSRVQDLIQLLNNQKADGVLIIAIWGMAGIGKTTIAKALYNQISHNFEVRKFVAGIQDRKGDYPIWVASKFIEKRLLLFLKDQVKTKAQNFDSTRNIWWEGIRCLKVLLILDNVRSERELEVLPVTRECFGPGSIIIFTTRTKHDRLHEIGVNHI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02182 339 Pfam TIR domain 12 165 IPR000157 GO:0007165
Aip02g02182 339 PRINTS Disease resistance protein signature 205 220 - -
Aip02g02182 339 PRINTS Disease resistance protein signature 285 299 - -
Aip02g02182 339 Gene3D - 5 169 IPR035897 -
Aip02g02182 339 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 120 IPR035897 -
Aip02g02182 339 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 21 328 - -
Aip02g02182 339 Pfam NB-ARC domain 186 327 IPR002182 GO:0043531
Aip02g02182 339 ProSiteProfiles TIR domain profile. 10 132 IPR000157 GO:0007165
Aip02g02182 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 328 IPR027417 -
Aip02g02182 339 SMART till_3 11 144 IPR000157 GO:0007165
Aip02g02182 339 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 328 IPR044974 GO:0006952
Aip02g02182 339 Gene3D - 170 332 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02182 Aip-Chr2 92156297 92158123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02182 5 327 WRKY Transcription Factor Family AT4G12020 29.290 3.20e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02182 - - aip:107627607 557.755