Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02181 aaactcgctcaaagttcatctcacatctttatgcatctcttgaaaatgctggtatctatgttttcaaggatgaagacgggctagcaagaggggaaaatctctcaatctcgcttctgaaagcaattggagagtctaaaacttctatcattattttgtcaccaaattatgcattttcaagatggtgtttgcaagagttggaagacatcatgatatgttgtagaaacaaaactcaaaaggtgctgccagtattctaccatatagatccctcagaagtgcgaaatcaaactggtaagtttggacaagcttttGATAACCTTATGAAAAGATATCCGGATAAAATAAAAGGCAAGGAGCAGAGTTGGAGGAAAGCACTCCGTGAAGTCGGGTGTATTGCGGGGAATGAAAGTAAGGATATTAAGAACATTGTTGAACAAGTTACTCATATGCTGGAAATGAAGGAATTGTTCGTTGCTAATCATCCCGTAGGAATTGAATCTCGTGTTGAAGAGGTGATTCAACTATTAAAAGACCAGCAACAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGAGTGGTAAAACAACCATTGCCAAAGCGGTTTATAATAAAATTTTCCGTGGGTTTGAAGGTCGGTGTTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTCATTTACAACAACAACTTCTTTCTGCTATCTACAAGACAACGAAAATAAAGATTGAAAACACTGAATCTGGAAAATCAATATTAGAGAGAAGACTTGGCCAGAAAAGGATACTTGTTGTACTTGATGATGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGTCATAAATGGTTCTGTCCTGGGAGCACAATAATCATCACAACAAGAGATGAACATCTTCTTCGTTGTCTTAGAGTTGATAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATGGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTcatattgtgagagattgccactggctcttgagAACCATTTACGATTTGCAGCCAAAGCATTTAGTTGCTCCAATTTGTCTACGTCATCAAGTACAACAGTATTGTATTGTTCTTCTCTCAACATCATCGATCATATCATGGCTGCTGCTACGGCAGAAGAGAAAGCTCCTGCTAGATTGGAAGAGGATTATACTCAAGATGGCACAGTGGATCTCAAAGGTAGACCCGTTTTAAGATCAAAGACTGGGAAATGGAAAGCTTGCTCCTTCATAGTAGGTAATAAATCAAATGAAGCCCTAATTCCGTGGCCTTAA 1370 0.2861 TRSKFISHLYASLENAGIYVFKDEDGLARGENLSISLLKAIGESKTSIIILSPNYAFSRWCLQELEDIMICCRNKTQKVLPVFYHIDPSEVRNQTGKFGQAFDNLMKRYPDKIKGKEQSWRKALREVGCIAGNESKDIKNIVEQVTHMLEMKELFVANHPVGIESRVEEVIQLLKDQQQENPLLLGIWGMGGSGKTTIAKAVYNKIFRGFEGRCFLLNIREVWDQDNGILHLQQQLLSAIYKTTKIKIENTESGKSILERRLGQKRILVVLDDVDKLEQLNSLAASHKWFCPGSTIIITTRDEHLLRCLRVDKLYSMKELNDKESMELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALENHLRFAAKAFSCSNLSTSSSTTVLYCSSLNIIDHIMAAATAEEKAPARLEEDYTQDGTVDLKGRPVLRSKTGKWKACSFIVGNKSNEALIPWP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02181 455 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 362 IPR044974 GO:0006952
Aip02g02181 455 Gene3D - 1 156 IPR035897 -
Aip02g02181 455 SMART AAA_5 181 316 IPR003593 -
Aip02g02181 455 Pfam NB-ARC domain 164 362 IPR002182 GO:0043531
Aip02g02181 455 Gene3D - 319 370 IPR042197 -
Aip02g02181 455 SMART till_3 1 130 IPR000157 GO:0007165
Aip02g02181 455 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 3 362 - -
Aip02g02181 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 366 IPR027417 -
Aip02g02181 455 Pfam TIR domain 1 148 IPR000157 GO:0007165
Aip02g02181 455 PRINTS Disease resistance protein signature 261 275 - -
Aip02g02181 455 PRINTS Disease resistance protein signature 184 199 - -
Aip02g02181 455 Gene3D - 157 314 IPR027417 -
Aip02g02181 455 CDD AAA 161 303 - -
Aip02g02181 455 ProSiteProfiles TIR domain profile. 1 127 IPR000157 GO:0007165
Aip02g02181 455 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 131 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02181 Aip-Chr2 92071825 92154484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02181 161 361 WRKY Transcription Factor Family AT5G45050 33.824 1.22e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02181 - - ahf:112727920 687.567