Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02178 ATGAGAAGTGAAAGAGAGCTGGAGGTTTTGCCAGTAATTCCTGAATGCTTTGGTCCAGGGAGTATAATAATCATCACGACAAGGACTAAACACGATCGACTTCATGAGATTGGAGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTTTTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGTGTGTTGGCTCTGCTGTATCTGAAAAAAGTATACAAGAGTGGGAGAATGTATTGGACAGCTTCAAAAGATTACCCTTTCAAGATGTATGGCAGGTTTTAAAAGAAAACATAGATTCTGTTGGATCTGAAGAAAAGAAAATATTCCTTGAACTAGCTTATTTGAGACATCTCTTTATTGGAATGAATCGAAATGATATAAGTCAGATATTACAAGAAGCTGGACATAATGTTGCACCAAGAGCAATTAAAGGACTTGAAGAGTATAGTCTTGTGTGGTTTGACGAGGACAAGCTTTGCATGAATCGTTTGCTACAAGATATCGGAGCTTCCACAGTAACATCAAGTGCTTCAAATATCTCAAAAGGGAGTAGCTCATCATTAATTGGTTACTGCAGTGAAGATGACATTATTGAATCAGAAAATTCCTTGAATTCAATTTTAATTCAAATGGGAATGAGTTGTTCAGTCACAGAGTTACTTAGGGAAAATATTTTGCAGAAGTTTAATGCAAGAGTACCTGGAGATTGCTTGCTTCCTGGCAACAAGAATCCTGATTGGTTAACATTCAGTTGTGAAGGTTCTTTTGTAATTTTTGACATCCCTCAGGTGAATGGGCATAAGTTAAAGTCAGTGATGTTGTGTATCATCTATTCTTCTTCCTCAAACATTGTACCTTTAGAAGGCCCTATCATTAAAAATTTGTGTATCATAAATCATACAAAGACCACCCCTTTTCTCTACGATGGAGATACACTGGCTTCACTTAGAGATGATGAATGGCAGAAAGTAATAGCGAACCTTGAAGCTGGTGACAAAGTGCAGATTGTTGTTTCTTCCGGATTAGGATTCACTGTGAAGAAGACAGCAGTTTATCTCATATATGCAGAGCAACAAGCTGAAGGTATTGTTTGTGGTGATGATATGGTAGCAGATGGAAATATCATTGTTCATGATGGAGAAGAAAATGATTTACTTCAAGGAGTAAACAAGAATTTCTCAAAAAAAAATTTGAAGTCACATACAAAACGAAAATTCAAAGAGTATGATGATACCAATCATTAA 1332 0.3626 MRSERELEVLPVIPECFGPGSIIIITTRTKHDRLHEIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSFSGLINYAIEYSDGLPLALVCVGSAVSEKSIQEWENVLDSFKRLPFQDVWQVLKENIDSVGSEEKKIFLELAYLRHLFIGMNRNDISQILQEAGHNVAPRAIKGLEEYSLVWFDEDKLCMNRLLQDIGASTVTSSASNISKGSSSSLIGYCSEDDIIESENSLNSILIQMGMSCSVTELLRENILQKFNARVPGDCLLPGNKNPDWLTFSCEGSFVIFDIPQVNGHKLKSVMLCIIYSSSSNIVPLEGPIIKNLCIINHTKTTPFLYDGDTLASLRDDEWQKVIANLEAGDKVQIVVSSGLGFTVKKTAVYLIYAEQQAEGIVCGDDMVADGNIIVHDGEENDLLQGVNKNFSKKNLKSHTKRKFKEYDDTNH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02178 443 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 5 205 - -
Aip02g02178 443 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 235 382 - -
Aip02g02178 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 140 IPR027417 -
Aip02g02178 443 Gene3D - 48 134 IPR042197 -
Aip02g02178 443 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 205 IPR044974 GO:0006952
Aip02g02178 443 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 235 382 IPR044974 GO:0006952
Aip02g02178 443 Pfam NB-ARC domain 19 130 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02178 Aip-Chr2 92037047 92039562 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02178 17 213 WRKY Transcription Factor Family AT5G45050 30.303 3.71e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02178 - - ahf:112749552 349.747