Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02176 ATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGGAACAAAAGCTATTGAGGGACTTGCTTTGAACCTGCCAAAGTCATTGAATCCAACTCAATTAAAGACAGAAGCATTTAAGGAGATGAAGAGACTGAGATTGCTTCAGTTTGCAAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACAGATCTTCGATGGTTGTGCTGGCATGAATGTTCTCCAGAATATACAACTGCAAACTTTTATCAAGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCGACCTAGTATGGAAGAAGGGTCAGATGATGAAGAATCTAAAAGTTCTCAATCTTAGTCATTCTCAACACTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAATTGACTTGGGTTTCTCATACCATTGAACATCTCAAGCAAGTTCTTCTAATCAATTTGAAAGGATGTTCAGGGCTTTGTGTACTTCCAAGAAGCATCTACAAGTTGAAATCTCTCAAAACTCTCATTCTCTCAGGATTTTCATTGATTGATAAGCTAGAGGAAGACATAGAACAGATGGAATCATTGGCAACTTTGATGGCAGATAAAACTGCCATAACACAAGTGCCTTATGCACTACTAAGATTAAAGAGCATTGTGTATATTAGTAGTCCCAAATAG 810 0.3654 MKELNDKESIELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEGTKAIEGLALNLPKSLNPTQLKTEAFKEMKRLRLLQFANVQLVGDFKYLSTDLRWLCWHECSPEYTTANFYQGNLVAIDFKYSKLDLVWKKGQMMKNLKVLNLSHSQHLTQTPDFSNMPNLEKLILKYCPKLTWVSHTIEHLKQVLLINLKGCSGLCVLPRSIYKLKSLKTLILSGFSLIDKLEEDIEQMESLATLMADKTAITQVPYALLRLKSIVYISSPK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02176 269 Gene3D Ribonuclease Inhibitor 46 267 IPR032675 -
Aip02g02176 269 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 4 46 - -
Aip02g02176 269 Coils Coil 226 246 - -
Aip02g02176 269 SUPERFAMILY L domain-like 64 265 - -
Aip02g02176 269 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 267 IPR044974 GO:0006952
Aip02g02176 269 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 57 267 - -
Aip02g02176 269 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 46 IPR044974 GO:0006952
Aip02g02176 269 Gene3D - 3 45 IPR042197 -
Aip02g02176 269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 46 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02176 Aip-Chr2 92008370 92009982 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02176 47 259 WRKY Transcription Factor Family AT4G12020 32.328 5.12e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02176 - - ahf:112727920 413.69