Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02175 ATGTTGAGTTATGAGGCCGCCCTTCTTCAACAAGCTGCTTCCATTTTACCCAGGTTTCTTCCAGATATCTGGAATAACAGAAAAGTTATGAGCGATATAGTTGGACATGTTACATCCTTGATAGATTCAGCGAAATTATTCATTGCGAAGCATCCGGTGGGAGTAGACTCTCGTGTGCAAGATTTGATTCAACTCTTAAACAATCAGAAAGCAGATGGTGTCCTCATAATAGCAATATGGGGAATGGCGGGAATAGGTAAAACTACAATTGCCAAAGCCCTCTACAATCAAATTAGCCACAATTTCGAGGCGAGGACATTTGTCCCAGACATCCAGGATAGCATGGCGGATTATACAAGGAGGCGGCTTCATTTCATTTTGAGAGACCCATATGAAACACAAGCGCATAACTTTGACTCAACAAGAAAGTTATGGTGGGAAGGACTTCGTTGCTTAAAGGTACTTCTTATAGTTGATAATGTGAGAAGTGACCTAGAGCTGGGGTTTTTGGCAGTAACTCGTGAAAGTTTTGGTCCAGGGAGTATAATAATCATCACGACAAGAGCTAAACACGATCGACTTCATGAGATTGGAGTTAATCATATATATAGAGTGAAAGAAATGGACTACAACGAATGTGTTGAGCTTTTTAGTTGGAGCGCATTCAACAAAGCCACTCCTGAAAGAAGTTTTTCTGGTCTTATTAATTATGCAATTGAATATTCTGATGGACTGCCACTGGCTCTTGTGTGTGTTGGCTCTGCTGTATCTGAAAAAAGTATACAAGAGTGGGAGAATGTATTGGACAGCTTCAAAAGATTCCCCTTTCAAGATGTATGGCAGGTTTTAAAAGAAAACATATTTTCTGTTGGATCTGATGATTTATAG 888 0.3986 MLSYEAALLQQAASILPRFLPDIWNNRKVMSDIVGHVTSLIDSAKLFIAKHPVGVDSRVQDLIQLLNNQKADGVLIIAIWGMAGIGKTTIAKALYNQISHNFEARTFVPDIQDSMADYTRRRLHFILRDPYETQAHNFDSTRKLWWEGLRCLKVLLIVDNVRSDLELGFLAVTRESFGPGSIIIITTRAKHDRLHEIGVNHIYRVKEMDYNECVELFSWSAFNKATPERSFSGLINYAIEYSDGLPLALVCVGSAVSEKSIQEWENVLDSFKRFPFQDVWQVLKENIFSVGSDDL 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02175 295 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 284 IPR044974 GO:0006952
Aip02g02175 295 Pfam NB-ARC domain 57 279 IPR002182 GO:0043531
Aip02g02175 295 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 23 284 - -
Aip02g02175 295 CDD AAA 53 101 - -
Aip02g02175 295 Gene3D - 208 292 IPR042197 -
Aip02g02175 295 Gene3D - 39 196 IPR027417 -
Aip02g02175 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 284 IPR027417 -
Aip02g02175 295 PRINTS Disease resistance protein signature 242 256 - -
Aip02g02175 295 PRINTS Disease resistance protein signature 148 162 - -
Aip02g02175 295 PRINTS Disease resistance protein signature 76 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02175 Aip-Chr2 91967237 91968752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02175 53 275 WRKY Transcription Factor Family AT5G45050 29.956 9.38e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02175 - - ahf:112727909 587.8