Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02174 ATGAAAAGATATCCGGATAAAATAAATGGCAAGGAGCAGAGTTGGAGGAAAGCGCTCCGTGAAGTCGGGTGCATTGCAGGGTTTGTCATCCGAAAATCCAGGAATGAAAGTGAGGATATTAAGAACATTGTTGAACATATTACTCATATGCTGGACATGAAGGAACTGTTTGTTGCTAATCATCCGGTAGGAGTTGAATCTCGTGTTGAAGAGGTGATTGAACTGTTAAAAGACCAGCAGCAAGAAAATCCTCTCCTACTTGGTATATGGGGCATGGGAGGGAGTGGTAAAACAACCATTAGCAAAGTGATTTATAATAAACTTTTCCGCAAGTTTGAAGGTCGGTGTTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTTATTTACAACAGCAACTTCTTTCTTCTATCTTCAAGACAACGAAAATAAAGGTAGAAAACATTGAATCTGGAAAGTCAATATTGGAAAAAAGACTTGGCCAGAAAAAGATTCTTCTTGTACTTGATGATGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGCCGTAAATGGTTCTGTCCCGGTAGCATAATAATCATCACAACAAGAGACGAGCATCTTCTAAGTTGTCTTAGAATTGACAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGTAATTGGGTCACATCTGTTTAATAGGAAAGTATATGAATGGAGGAGTGTTTTGAATAAACTCAAAACTATTCCAAACAATGATGTACAGAAGAAGCTTAAAATAAGTTTTGATGGTCTAAGTGATGATAGGAGAGTTGGAGGAAAGCACTCCGTGAAGTTGGGTGCATTGCAGGGTTTGTCATCCGAAAATCCAAGTAAATTAATTAATATCCTTCATATTTTGCAGGAATCTCTCTATTCTATCTACAGGAATGAAAGTGAGGATATTAAGAACATTGTTGAACAAGTTACTCATATGCTGGAAATGAAGGAATTGTTCGTTGCTAATCATCCTGTAGGAGTTGAATCTCGTGTTGAAGAGGTGATTCAACTATTAAAAGACCAGCACCAAGAAAATCCTCTACTACTTGGTATATGGGGCATGGGAGGGTGTGGTAAAACAACCATTGCCAAAGCGGTTTATAATAAAATTTTCCGTGAGTTTGAAGGTCGGTGTTTCCTCCTAAATATAAGAGAAGTTTGGGATCAAGATAATGGAATTCTTTATTTACAACAGCAACTTCTTTCTTCTATCTTCAAGACAACGAAAATAAAGGTAGAAAACATTGAATCTGGAAAGTCAATATTGGAAAAAAGACTTGGCCAGAAAAAGATTCTTCTTGTACTTGATGATGTGGACAAATTGGAGCAGCTAAATTCTTTAGCTGCAAGCCGTAAATGGTTCTGTCCTGGTAGCATAATAATCATCACAACAAGAGACGAGCATCTTCTACGTTGTCTTAGAATTGACAAGTTATATAGTATGAAAGAGTTAAATGACAAAGAATCCATTGAACTTTTTAGCTGGCATGCATTCAAAGAACCATGTCCAAAAGAAGAGTTTGCTTCACTTGCTAATGAAGTTGTTTCATATTGTGAGAGATTGCCACTGGCTCTTGAGGGAACAAAAGCTATTGAGGGACTTGCTTTGAACCTACCAAAGTCACTGAATCCAACCCACTTAAAGACAGAAGCATTTAAGGAGATGAAGAGACTCAGATTGCTTCAGTTTGCGAATGTGCAACTTGTTGGAGACTTTAAATTTCTTTCGACAGATCTTCGATGGTTGTGCTGGCATGAATGTCCTCCAGAATATACAATTGCAAACTTTTATCAGGGAAATTTAGTTGCCATTGACTTCAAATATAGCAAACTCAACCTAGTATGGAAGAAGGGTCAGATGATGAAGAATCTAAAAATTCTCAATCTTAGTCATTCTCAACACTTGACACAAACTCCTGACTTTTCAAATATGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTCGGTTTCTCATACCATTGAACATCTCAAGCAAGTTCTTCTAATCAATTTGAAAGGGTGTTCAAGGCTTCGTGTACTTCCAAGAAGCATCTACAAGCTGAGATCTCTCAAAACTCTCATTCTCTCAGAATGTTCATTGATTGATAAGCTAGAGGAAGACATAGAACAGATGGAATCATTGGCAACTTTGATGGCAGATAAAACTGCCATAACACAAGATTATCGCGCAATGTGTTTCCTTCACACTTGGAAAACGAAAACTCCAGAGAGTGTGATCACCAAAGAGTATTGTGTGACTTGTCAATTTGAGTTGAAATTGTGGGGATGTAAGTATTGGCTCCAGAGAGGATGCAACAAGAGGTGCAGATGA 2502 0.3741 MKRYPDKINGKEQSWRKALREVGCIAGFVIRKSRNESEDIKNIVEHITHMLDMKELFVANHPVGVESRVEEVIELLKDQQQENPLLLGIWGMGGSGKTTISKVIYNKLFRKFEGRCFLLNIREVWDQDNGILYLQQQLLSSIFKTTKIKVENIESGKSILEKRLGQKKILLVLDDVDKLEQLNSLAASRKWFCPGSIIIITTRDEHLLSCLRIDKLYSMKELNDKESIELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEVIGSHLFNRKVYEWRSVLNKLKTIPNNDVQKKLKISFDGLSDDRRVGGKHSVKLGALQGLSSENPSKLINILHILQESLYSIYRNESEDIKNIVEQVTHMLEMKELFVANHPVGVESRVEEVIQLLKDQHQENPLLLGIWGMGGCGKTTIAKAVYNKIFREFEGRCFLLNIREVWDQDNGILYLQQQLLSSIFKTTKIKVENIESGKSILEKRLGQKKILLVLDDVDKLEQLNSLAASRKWFCPGSIIIITTRDEHLLRCLRIDKLYSMKELNDKESIELFSWHAFKEPCPKEEFASLANEVVSYCERLPLALEGTKAIEGLALNLPKSLNPTHLKTEAFKEMKRLRLLQFANVQLVGDFKFLSTDLRWLCWHECPPEYTIANFYQGNLVAIDFKYSKLNLVWKKGQMMKNLKILNLSHSQHLTQTPDFSNMPNLEKLILKYCPKLTSVSHTIEHLKQVLLINLKGCSRLRVLPRSIYKLRSLKTLILSECSLIDKLEEDIEQMESLATLMADKTAITQDYRAMCFLHTWKTKTPESVITKEYCVTCQFELKLWGCKYWLQRGCNKRCR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02174 833 CDD AAA 63 205 - -
Aip02g02174 833 Gene3D - 2 48 IPR035897 -
Aip02g02174 833 Gene3D - 221 305 IPR042197 -
Aip02g02174 833 Gene3D - 535 578 IPR042197 -
Aip02g02174 833 SUPERFAMILY L domain-like 596 783 - -
Aip02g02174 833 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 339 578 IPR044974 GO:0006952
Aip02g02174 833 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 586 783 IPR044974 GO:0006952
Aip02g02174 833 PRINTS Disease resistance protein signature 256 270 - -
Aip02g02174 833 PRINTS Disease resistance protein signature 86 101 - -
Aip02g02174 833 PRINTS Disease resistance protein signature 163 177 - -
Aip02g02174 833 PRINTS Disease resistance protein signature 671 687 - -
Aip02g02174 833 CDD AAA 377 519 - -
Aip02g02174 833 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 339 578 - -
Aip02g02174 833 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 586 783 - -
Aip02g02174 833 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 11 306 - -
Aip02g02174 833 Gene3D - 359 528 IPR027417 -
Aip02g02174 833 Gene3D - 49 214 IPR027417 -
Aip02g02174 833 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 306 IPR044974 GO:0006952
Aip02g02174 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 578 IPR027417 -
Aip02g02174 833 SMART AAA_5 397 532 IPR003593 -
Aip02g02174 833 SMART AAA_5 83 218 IPR003593 -
Aip02g02174 833 Coils Coil 758 778 - -
Aip02g02174 833 Gene3D Ribonuclease Inhibitor 579 812 IPR032675 -
Aip02g02174 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 308 IPR027417 -
Aip02g02174 833 Pfam NB-ARC domain 380 578 IPR002182 GO:0043531
Aip02g02174 833 Pfam NB-ARC domain 66 295 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02174 Aip-Chr2 91962181 91966610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02174 583 738 WRKY Transcription Factor Family AT5G45050 31.325 1.01e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02174 - - ahf:114924874 596.66